Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car14g00235 ATGGAATGGGCCACCGGAAGTTTCAGACCCTTTCTTTCTCGGCCACCGGAATCTTCCTTTGGCTTTCTCTATAACTATAATCTTGAACAATATCAGGGCATCGATGTGAAGCATTCGGCCATGGCGGGGACGTCTGAGACCGTGCTCCAAGGGCTGGTTCCAGGGATGGATATGAACAGCTATGGAAATTTGGATAAGAAGAAGCGGCTGAGCAGCGAGCAGCTCGAGTCGCTCGAACGTAGCTTCCAGGAGGAGATCAAGCTCGATCCCAATCGGAAGCAGAAGCTGTCGAAGGAGCTCGGTCTGCAGCCGCGCCAGATCGCCGTTTGGTTTCAGAACCGGCGTGCGAGGTGGAAGGCGAAGCAGCTCGAGCATCTCTACGATACTCTCAAACAAGAGTTCGATGCCATTTCTAGAGAGAAACACAAGCTTCAAGAGGAGGTCATAAAGCTGAGGAGTATGCTGAGAGAGCTTCAAGCTGCAAGGAACCAAGTATCGACGGTGTACACTGATTTGTCGGGCGAGGAGACAGTGGAAAGCACCTCCGTCGGAGCTGGCTGCTCGAGCAAGCCGAGAGCGGTGGCAGCAGCAGCAGCAGCAGCAGCAGCAAACCAGTACCCGACGCCACCGGAGCAGTGCAACTACGTGTTCAACACAGAGGAATACAACCCGATGTCTCCAACTTTCTGGGGGTCTCTGCCACCCACATATCATCCCCAGTAG 723 54.08 MEWATGSFRPFLSRPPESSFGFLYNYNLEQYQGIDVKHSAMAGTSETVLQGLVPGMDMNSYGNLDKKKRLSSEQLESLERSFQEEIKLDPNRKQKLSKELGLQPRQIAVWFQNRRARWKAKQLEHLYDTLKQEFDAISREKHKLQEEVIKLRSMLRELQAARNQVSTVYTDLSGEETVESTSVGAGCSSKPRAVAAAAAAAAANQYPTPPEQCNYVFNTEEYNPMSPTFWGSLPPTYHPQ 240
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 1099946 1101468 - Carg03720-RA Car14g00235 160137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car14g00235 240 Pfam Homeobox associated leucine zipper 121 155 IPR003106 GO:0006355|GO:0043565
Car14g00235 240 Pfam Homeodomain 66 119 IPR001356 GO:0003677
Car14g00235 240 ProSitePatterns 'Homeobox' domain signature. 96 119 IPR017970 GO:0000981|GO:0006355
Car14g00235 240 Coils Coil 113 164 - -
Car14g00235 240 ProSiteProfiles 'Homeobox' domain profile. 61 121 IPR001356 GO:0003677
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car03g01067 Car14g00235 CCT
Car06g00370 Car14g00235 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car14g00235 Car-Chr14:1099946 Car16g00757 Car-Chr16:4792081 1.49E-28 dispersed
Car14g00235 Car-Chr14:1099946 Car03g01067 Car-Chr3:8677389 4.01E-48 wgd
Car14g00235 Car-Chr14:1099946 Car06g00370 Car-Chr6:2036782 2.23E-162 wgd
Car14g00235 Car-Chr14:1099946 Car07g00855 Car-Chr7:4529568 1.25E-47 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
4606 PF00046 Homeodomain 2.50E-17 CL0123 Car TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car14g00235 - - csv:101221983 438.343