Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car14g00237 ATGGAACCCAATAGTTTAGGCGGCGGCGGCGGTGCTAGTGGAGGGATGTTTCCCGGCATAAGTTCGTCAATGCTGGGATTGGAATTGCCACTTCATCAAAACCCCTCAAATCCTCACCAATTACACCACCCCCCAATGGTGTCATATGTCCCACACGAGGCCCACCACCAACAACAACCGCCGCCGGCCGCAGTGAAATGCCCATACCCGGCGAAGCCTAAGCCGCAGCAGTCGAATGTCAGCGACGAGGAGGAGCAGGGATTAGCGGACGACAGCAACAGCGACGCCAAGAAGAAAATCTCGCCGTGGCAGAGGATGAAATGGACGGACATGATGGTCCGGCTGCTGATCACGGCGGTGTTCTACATCGGCGACGAAGGTGGGTCGGAGCCGATGGACCATGCCAGCAAGAAAAAACCAGTGGGGCTTCTGCAAAAGAAGGGGAAATGGAAATCCGTATCCAGAGCAATGATGGAAAAAGGATTCTACGTTTCACCGCAGCAATGCGAAGACAAATTTAACGATTTAAATAAAAGATACAAACGAGTTAACGACATTTTGGGGAAGGGCACCGCCTGCAGAGTCGTCGAGAATCACACCTTATTGGAATCAATGGAATTAACACCGAAAGTGAAAGAAGAAGTCCGAAAATTACTCAATTCTAAACATCTTTTCTTCAGAGAAATGTGCGCTTACCACAACACTTGCCGTCATGGCGCCGGCAACAGCAGCGGCGGCGGTGCCAATACCTCACCAGAGGCGGGGACAGAACCATCCCACCTTCCACAACAACAACAACAGCAACGATGCTTCCACGCGACGGAGACCGCTCCAGCCGCCACGGCCGGCGAGGGTTCGAAAAGCGGAGATGAGGAAGAGGAAGACGAGGATGAGGATGATGAAACGGAAGAAGACGATGAGGAGGTGGAGGAGGAGGAGATTGATGGAAGTTCGAAAGTACAGGAAGAGGAGGAGGAAACGGAATCGAAGAAGAGGGGGAGAAAAGAAGGATTCACATCGGGGATTCAGCAGATGTGTGCGGAGGTGATGGGAGTTGTGCAGGACGGGGGGAGGAGCCCGTGGGAGAAAAAGCAATGGATGAAGAGGCGATTGATTCAGCTAGAAGAGCAGCAAGTGGAATACCAATCGCAGGGCTTAGAGATTGAGAAACAGAGACTGAAATGGCTGAAGTTTAGGAGGAAGAAGGAGAGGGATATGGAGAGAGCGAAGCTGGAGAACGAGAAGAGAAGGCTGGAAAACGAGAGGATGATGCTGATGGTGAAGCAGAAGGAACTCGATTTGACGGATCTGCACAATTATCAGCAGCAGCAGCAGCAGCAGCAGCATTCCTCGAACAGGCGAGGTGATCCATCTTCGATCACAGGTTGA 1389 52.12 MEPNSLGGGGGASGGMFPGISSSMLGLELPLHQNPSNPHQLHHPPMVSYVPHEAHHQQQPPPAAVKCPYPAKPKPQQSNVSDEEEQGLADDSNSDAKKKISPWQRMKWTDMMVRLLITAVFYIGDEGGSEPMDHASKKKPVGLLQKKGKWKSVSRAMMEKGFYVSPQQCEDKFNDLNKRYKRVNDILGKGTACRVVENHTLLESMELTPKVKEEVRKLLNSKHLFFREMCAYHNTCRHGAGNSSGGGANTSPEAGTEPSHLPQQQQQQRCFHATETAPAATAGEGSKSGDEEEEDEDEDDETEEDDEEVEEEEIDGSSKVQEEEEETESKKRGRKEGFTSGIQQMCAEVMGVVQDGGRSPWEKKQWMKRRLIQLEEQQVEYQSQGLEIEKQRLKWLKFRRKKERDMERAKLENEKRRLENERMMLMVKQKELDLTDLHNYQQQQQQQQHSSNRRGDPSSITG 462
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 1109659 1111047 + Carg03718-RA Car14g00237 160139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car14g00237 462 PANTHER F16F4.11 PROTEIN-RELATED 14 459 - -
Car14g00237 462 MobiDBLite consensus disorder prediction 1 99 - -
Car14g00237 462 MobiDBLite consensus disorder prediction 241 274 - -
Car14g00237 462 MobiDBLite consensus disorder prediction 241 338 - -
Car14g00237 462 Pfam Myb/SANT-like DNA-binding domain 105 231 IPR044822 -
Car14g00237 462 MobiDBLite consensus disorder prediction 323 337 - -
Car14g00237 462 MobiDBLite consensus disorder prediction 435 462 - -
Car14g00237 462 MobiDBLite consensus disorder prediction 436 462 - -
Car14g00237 462 MobiDBLite consensus disorder prediction 27 41 - -
Car14g00237 462 MobiDBLite consensus disorder prediction 288 322 - -
Car14g00237 462 PANTHER SEQUENCE-SPECIFIC DNA BINDING TRANSCRIPTION FACTOR 14 459 - -
Car14g00237 462 Gene3D - 108 182 - -
Car14g00237 462 Coils Coil 399 431 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car06g00372 Car14g00237 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car14g00237 Car-Chr14:1109659 Car15g00553 Car-Chr15:3054616 6.45E-82 dispersed
Car14g00237 Car-Chr14:1109659 Car06g00372 Car-Chr6:2050138 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
4607 PF13837 Myb_DNA-bind_4 4.40E-21 CL0123 Car TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car14g00237 - - cmax:111498678 622.854