Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car14g00239 CTTCTTCATCTTCTTCTTCCTCACTCACTCAGACACAGACAAACCGATAGGACATTGGTTCGCTTTTATCAACTTGGGTTCCTTCAAACAAAGACACCCTTCTTCCTGACTCTTCCCTCTCAGCCATTTCTCCCACCCAATTGCCCACAGATCATCATCATCATCATGATGCCGGCGAACATTTGCAGTTTCGCCGTCGCCCTCTTTCTCTCTCTTACCCTTTTGGCCTCTGCTTCTCTCTCTTTGGACGACGGCGACGACACCTCTGCTCTTACTCGCTTCCGTCTTCAAGCTGATTCTCACGGCGGCCTTCTAAGAAATTGGACTGGTTCTGATGCCTGTGCTTCTTCATGGCGTGGAGTTCAATGCTCTGTTAATGGCCGTGTTGTTGCTCTTTCTCTTCCTTCTATGAACTTACGAGGACCCATTGAGTCTCTTGCGCCGCTCCACCAGCTCCGCGTTCTCGACCTCCACGACAACCGTTTGAATGGTACCATTTCGCCGCTTCTGAACTGCACGAATCTCAAGCTGTTGTATCTCTCTGGCAACGACTTCTCTGGAGAGATTCCGCCGGAGATCTCTTCTCTACGGCGACTCCTAAGGCTAGATTTGTCAGATAACAACATCCGCGGCGGAATCCCGGAGGATCTCGCTAAATTGTCTCGGCTTCTTACACTCCGTTTGCAGAACAATGTTCTCTCCGGTACGGTGCCCGATTTCTCTGTTTCGCTTGTGAATCTCACTGAACTTAATTTAACCAACAATGAACTGTCCGACCGGTTACCGGACGGGATGATGAAGAAATTCGGCGAGAAGAGTTTCACTGGAAACGAAGGGATTTGTGGATCGAGTCCGTTACCGATCTGTTCGGTTACTGGTTCACCGCCGGAGATGGATTCTAGCAGAACGGTACCTTCAAATCCAAGCTCATTGCCGCAAAACCCTATCATCAGTTCATATAATAAAGAATCGCGAAAAGGGCTTAGCCCTGGCGCGATTGTCGCGATTGTGATCGCAAATTGCGTAGCGTTGCTTGTAATCATCTCGTTTATTGTGGCGTATTACTGCGCTCGTGATCGTGACCGGAGTTCAAGCTCCATGGCCGGAAGCGAGAGCGGTAAGAGAAGGAAGAGCGGAAGTAGCTACGGCAGCGAGAAGAAGGTGTACGCCAACGGCGGCGGCGACAGTGATGGCACTAACGCTACAGACAGAAGCAAATTGGTGTTCTTCGATTGGAAGAAGCAATTCGAGCTTGAAGATTTGTTGAGAGCGTCGGCGGAGATGCTCGGAAAAGGAAGCTTGGGGACTGTTTACAGGGCGGTGCTGGACGACGGTTGTACGGTGGCGGTGAAGAGATTGAAGGACGCAAACCCATGTCCGAGGAAGGATTTTGAACAGTATATGGAGGTGATTGGGAAGCTTAAGCATCCAAATATTGTTAGATTGAGAGCTTTTTACTACGCTAAAGAAGAAAAGCTTCTGGTTTATGAATATCTTCCAAATGGGAGTCTTCATAATCTTCTCCATGGGAATCGAGGGCCAGGGAGGATTCCATTGGATTGGACGACCAGGATCAGTTTAGTTCTTGGAGCTGCTCGTGGGCTAGCAGCCATCCATGGAGAATACAAAGCTTCAAACATTCCCCATGGCAATGTCAAATCTTCCAATGTTCTTCTCGACAAAAATGGAGTTGCTTGCATTTCCGATTTCGGGTTGTCTCTTCTTCTCAATCCCGTTCATGCCATTGCACGGTTGGGAGGATACAAAGCACCCGAACAAGACGAGACGAAACGACTCTCTCAAAAGGCAGATGTTTATAGCTTTGGAGTTTTGTTGTTAGAAGTCTTGACGGGGCGTGCTCCGTCGCTCTACCCGTCACCTTCGCGCCCACGTAACGACAAGGAAGAGTTGTCGGTGGACCTCCCGAAATGGGTTCGATCCGTGGTGAAGGAAGAGTGGACGGCTGAGGTGTTTGATCCGGAGCTATTGAGGTATAAGAACATTGAGGAGGAGCTTGTGTCTATGCTTCATGTGGGGTTGGCTTGTGTTCTTCCTCAGCCTGAGAAGAGACCAACAATGGCGGAAGTGACAAAGATGATCGAAGATATTAGGGTCGAGCAGTCCCCGCTCGGAGAAGACTACGACGAATCGCGTAACTCGCTTTCGCCTTCCATTGCCACCACAGAAGATGGTATGGCGTAG 2202 49.55 LLHLLLPHSLRHRQTDRTLVRFYQLGFLQTKTPFFLTLPSQPFLPPNCPQIIIIIMMPANICSFAVALFLSLTLLASASLSLDDGDDTSALTRFRLQADSHGGLLRNWTGSDACASSWRGVQCSVNGRVVALSLPSMNLRGPIESLAPLHQLRVLDLHDNRLNGTISPLLNCTNLKLLYLSGNDFSGEIPPEISSLRRLLRLDLSDNNIRGGIPEDLAKLSRLLTLRLQNNVLSGTVPDFSVSLVNLTELNLTNNELSDRLPDGMMKKFGEKSFTGNEGICGSSPLPICSVTGSPPEMDSSRTVPSNPSSLPQNPIISSYNKESRKGLSPGAIVAIVIANCVALLVIISFIVAYYCARDRDRSSSSMAGSESGKRRKSGSSYGSEKKVYANGGGDSDGTNATDRSKLVFFDWKKQFELEDLLRASAEMLGKGSLGTVYRAVLDDGCTVAVKRLKDANPCPRKDFEQYMEVIGKLKHPNIVRLRAFYYAKEEKLLVYEYLPNGSLHNLLHGNRGPGRIPLDWTTRISLVLGAARGLAAIHGEYKASNIPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVHAIARLGGYKAPEQDETKRLSQKADVYSFGVLLLEVLTGRAPSLYPSPSRPRNDKEELSVDLPKWVRSVVKEEWTAEVFDPELLRYKNIEEELVSMLHVGLACVLPQPEKRPTMAEVTKMIEDIRVEQSPLGEDYDESRNSLSPSIATTEDGMA 733
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 1117424 1119909 - Carg03716-RA Car14g00239 160141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car14g00239 733 MobiDBLite consensus disorder prediction 291 318 - -
Car14g00239 733 Pfam Leucine rich repeat N-terminal domain 85 124 IPR013210 -
Car14g00239 733 MobiDBLite consensus disorder prediction 707 733 - -
Car14g00239 733 Pfam Leucine Rich repeats (2 copies) 151 186 IPR025875 -
Car14g00239 733 Pfam Protein kinase domain 427 698 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car14g00239 733 ProSiteProfiles Protein kinase domain profile. 423 705 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car14g00239 733 ProSiteProfiles Leucine-rich repeat profile. 151 173 IPR001611 GO:0005515
Car14g00239 733 MobiDBLite consensus disorder prediction 363 397 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car06g00374 Car14g00239 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car14g00239 Car-Chr14:1117424 Car18g00926 Car-Chr18:10004979 1.54E-176 dispersed
Car14g00239 Car-Chr14:1117424 Car06g00374 Car-Chr6:2060553 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
89313 PF00069 Pkinase 1.60E-34 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car14g00239 - - bhj:120091526 1140.95