Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car14g00252 ATGGAAATGGAGAGCTCGCGGAGACCTTTCGATCGAACGAGGGAACCGGGTTTGAAGAAGCTTCGACTGGCCGATGAGGCTGACCGCGGTGGGAACATTAATGGCCGGCCGTTTCCGCAGAGACCAGTTGTTTCCGGAACCAATATCGCTCAATCCAGATTTCGAGCAAGCGATAGGGATCCGGGAAGCAGTGATTCTGGTCGAGTGGGGTATCAGCCTCAGCCGCCGCAGCATCAGGAGCTTGTGAGCCAGTACAGGACAGCCCTTGCTGAGCTGACTTTCAATTCCAAACCAATCATCACGAATTTGACCATAATCGCGGGTGAAAATCTCCAGGCTGCAAAAGCGATCTCTGCCACTATTTGTGCCAACATTCTCGAGGTTCCCACTGAGCAGAAGCTGCCATCACTTTATCTATTGGACAGTATTGTAAAGAATATTGGAAGAGATTACATAAAATACTTTGCAGCAAGACTACCGGAGGTATTCTGCAAAGCTTATAGGCAAGTCGACCCATCTGTTCATACAAGCATGAGACATCTTTTTGGCACCTGGAAAGGAGTGTTTCCTCCTCAGACTCTGCAGATTATCGAGAAAGAACTTGGCTTCGTGTCTAGCGGTAGTGCTTCTTCTGGGACCATAACCTCGAAGCCAGATTTGCAGGCACAACGTCCACCCCATAGTATCCATGTAAATCCCAAGTATATTAAGAGGCAACGCCTTCAGCAGTCAGGCAGGGTGAAAGGAATGACTAGTGATGGTACTGGCGCAACAACTGTAACTCAGGATGTTGCCCAAGCCAAAATTAGTTCTGGACGCCCGTGGGCGGATACACCAATTAAAGGGCTTGATATTCAGCGTCCAGTTAGAGATGCACCAAATGATTTGGCACAAGAGAAGAACGTGACCGCTGCATATCTAGACTATGAATGTGGTTCTGATCTTTCAAGGACATCAGGTGTTGGAAGGAGGGTCGTTGATGAAGGGCAAGACAAATCTTGGTCTTTAGCTGGAAACAATTTGGCTGAGAAATTATCTGGACAAAGAAATGGGTTCAACAACAAGCTTGGATATGAAAATTACCCTGCACCCAAGTCTGCAAACACTGGTGCACGTCTACTGCCCATGCAAAAATTTTCAAGCGGCAGCAGCAACAGAGTGTTGTCTACTAACTGGAAGAACTCTGAGGAAGAGGAGTTTATGTGGGGTGAAATGAACCCTATGTTGACAGGTCATGGTGCACCTGCCATCGCCAGTAGCACCGGGAAGGATCAATGTACTCCTGAGGATTCGGATAATTCGGGTACTGACAATAAGCCATTAAGCATACGAGATACTGGGGCAAGTGTTGATAGGGAAGCTTCCTTTGATTCACAATCATCTGAGCAGAGAGAACTAGGGGATTCTGGACAGCAAAGGTCATCAATGTGGCAGTTCCAGGAGGCAATATCTCTGGATGGGCTGAGAGGCAGGGTTCCTAGAAAGAATTCAGCTCAATCAGGAGGTTATGGTGCCACTCTAACCGCAATGTCAGGTGCTAACTCTTCTGTGGATCAAATGGGAGGACGATCACAGATCACATCATCTAATATTGGAGCTTCAGGACATGGGTTTCTGAATAAAGGAGGTTCAGGGTCCCTTGGGACTGTAGGCCATCCAAGATTTCCATCACAAAGTGTTGCATTACCATCTGGACAGCCACCCTTGCACCAGCGCCCCCCTTCACCATTAGTGGATCATGTCGCTCATAAAAAACAAAGCCATAAAACTTCATTTCCTAATCTTGACCCACGTAGAAGGCATATACGGGATGCTGCCCTTGGCCTGCATCCCAACATTCGGCCAGATAACCTTCAAAAACCACAGCCTCAGGACCTACAAGCTTCAGCTTCATCCATACCTGCTTCTCAAACCAGGCACCGGTCACTGAAACCTGAAGTCACGCAGTCGGAACTTTCTAGTCAGCATGCAGTATCAATTCCGGACACCGATTTTGGACCGCCCTCATCGGCTGGGACAGTTCTAGAACTCTTACCTGCAGAAATTTTGGGAGAGCCAAGCACTAGTAGTTTGTTGGCTGCTGTAATGAAAAGTGGAATTTTGTCCAAGCATTCAATAATCAGTAGCATGCAACAGAATTTCAGCTCCCAAGATGTGGGAAATATGCAACCCCGTTCAAGCGTCAACCCTCCTCTACCAAGTCAGTCTTCTCCTGCCCATACTCAGTCTACATTCTCAGAGCCAAAGACTGTGGGCGAATCTTCATTAGGTCCTCCATCTCTTGAAAGCACATCAACGCTGGTTAAGTTATCTCAGATTAAGGTAGAAGACACACCGTTGCCATCTGATCCACTTCCTCCTTCATCTACTATGAATAGTGCATCCACTGAAACTTCAAATGTGGTAAACGATGATTCTAGTCCAATTTCTAACCTTTTGAGCTCATTGGTCGCAAAGGGCCTCATATGTGCTTCTAAAGGAGAATTAGCAAGTAACGTTACATCCCAGATGCCTTCACAGCCTGAAAATTTGAAGTCGGGTGATGTTGTGACTTGTTCTATACCAGTTCCTTCCATCCCTATTCCCTCTTCCAGTCAATCATCTATAAGACCTGAATCACCTTCGAAAGCTGCTGCTCAGAGCTCCACTACTCCACCTCCATCTGCCACAACTGAGATAAACAACCTCATAGGCTATGAGTTTAGTTCACACGTTATTCGCAAATTTCATCCATCTGTGATCAGTGGACTCTTTGACGATATTCCATTTCAATGTAAGATCTGCGGTCTTAGACTGAAATGTGAAGAACGGTTGGATACGCACTTGTGGTGGCACATGTCAAGAACTGAGTCAAAAAATTCATGTAGGGCACCAAGAAGATGGTATCCAAGTTCAGTTGATTGGGTATCTGGAAATGCTAGACTTCTACTTGACGCTGCCTCTTCTCTGGACAAGTCCAGCATGATGGAAGAAGATAACGAGCCAATGGTTCCGGCAGATGAAGACCAATTTGCCTGTGTTTTATGTGGTGAGCTTTTTGAAGATTTTTATAGTCAAGAGTTGGGTAAGTGGATGTTCAAAGGAGCAATGCATATCACCATCCCATCAGTGGGTAGTGAGGTAGGAAGCACAAATGAACGAGTTGCTATAGGACCCATTGTGCACATAAGTTGCTTAACTGAAAGTTCAATACACGAGTTGGGACTGGCAACTGATATTAAGAAGTATGCTCAATCTGTATCGATGTTGCGCTTGAGGAAACGGATGTATGATGCTTCCCTGCAAAACGTAATACTGGAACTACTCTGGGTGCATCCTGCTCGTGCAATTGGCATGGGAATGCGGAAAGGGAGTATGGATTTGAGTGCTTCGCTCGTGGTTAGATTGATTGAGCAAGAGATTATAGGGAGTGGTAGCTCTAATACTGGTATTTTCTAG 3438 46.19 MEMESSRRPFDRTREPGLKKLRLADEADRGGNINGRPFPQRPVVSGTNIAQSRFRASDRDPGSSDSGRVGYQPQPPQHQELVSQYRTALAELTFNSKPIITNLTIIAGENLQAAKAISATICANILEVPTEQKLPSLYLLDSIVKNIGRDYIKYFAARLPEVFCKAYRQVDPSVHTSMRHLFGTWKGVFPPQTLQIIEKELGFVSSGSASSGTITSKPDLQAQRPPHSIHVNPKYIKRQRLQQSGRVKGMTSDGTGATTVTQDVAQAKISSGRPWADTPIKGLDIQRPVRDAPNDLAQEKNVTAAYLDYECGSDLSRTSGVGRRVVDEGQDKSWSLAGNNLAEKLSGQRNGFNNKLGYENYPAPKSANTGARLLPMQKFSSGSSNRVLSTNWKNSEEEEFMWGEMNPMLTGHGAPAIASSTGKDQCTPEDSDNSGTDNKPLSIRDTGASVDREASFDSQSSEQRELGDSGQQRSSMWQFQEAISLDGLRGRVPRKNSAQSGGYGATLTAMSGANSSVDQMGGRSQITSSNIGASGHGFLNKGGSGSLGTVGHPRFPSQSVALPSGQPPLHQRPPSPLVDHVAHKKQSHKTSFPNLDPRRRHIRDAALGLHPNIRPDNLQKPQPQDLQASASSIPASQTRHRSLKPEVTQSELSSQHAVSIPDTDFGPPSSAGTVLELLPAEILGEPSTSSLLAAVMKSGILSKHSIISSMQQNFSSQDVGNMQPRSSVNPPLPSQSSPAHTQSTFSEPKTVGESSLGPPSLESTSTLVKLSQIKVEDTPLPSDPLPPSSTMNSASTETSNVVNDDSSPISNLLSSLVAKGLICASKGELASNVTSQMPSQPENLKSGDVVTCSIPVPSIPIPSSSQSSIRPESPSKAAAQSSTTPPPSATTEINNLIGYEFSSHVIRKFHPSVISGLFDDIPFQCKICGLRLKCEERLDTHLWWHMSRTESKNSCRAPRRWYPSSVDWVSGNARLLLDAASSLDKSSMMEEDNEPMVPADEDQFACVLCGELFEDFYSQELGKWMFKGAMHITIPSVGSEVGSTNERVAIGPIVHISCLTESSIHELGLATDIKKYAQSVSMLRLRKRMYDASLQNVILELLWVHPARAIGMGMRKGSMDLSASLVVRLIEQEIIGSGSSNTGIF 1145
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 1172867 1179813 + Carg03703-RA Car14g00252 160154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car14g00252 1145 Pfam CID domain 87 195 IPR006569 -
Car14g00252 1145 MobiDBLite consensus disorder prediction 787 805 - -
Car14g00252 1145 MobiDBLite consensus disorder prediction 420 443 - -
Car14g00252 1145 MobiDBLite consensus disorder prediction 452 475 - -
Car14g00252 1145 MobiDBLite consensus disorder prediction 542 667 - -
Car14g00252 1145 MobiDBLite consensus disorder prediction 712 765 - -
Car14g00252 1145 ProSitePatterns Zinc finger C2H2 type domain signature. 925 945 IPR013087 -
Car14g00252 1145 ProSiteProfiles CID domain profile. 77 205 IPR006569 -
Car14g00252 1145 MobiDBLite consensus disorder prediction 406 475 - -
Car14g00252 1145 MobiDBLite consensus disorder prediction 859 888 - -
Car14g00252 1145 MobiDBLite consensus disorder prediction 617 660 - -
Car14g00252 1145 MobiDBLite consensus disorder prediction 577 607 - -
Car14g00252 1145 MobiDBLite consensus disorder prediction 1 76 - -
Car14g00252 1145 MobiDBLite consensus disorder prediction 777 805 - -
Car14g00252 1145 MobiDBLite consensus disorder prediction 1 29 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car06g00388 Car14g00252 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car13g00585 Car-Chr13:7670583 Car14g00252 Car-Chr14:1172867 8.78E-34 dispersed
Car14g00252 Car-Chr14:1172867 Car18g00292 Car-Chr18:1722188 4.02E-32 dispersed
Car14g00252 Car-Chr14:1172867 Car06g00388 Car-Chr6:2115068 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car14g00252 K14400 - csv:101223169 1676.37