Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car14g00256 ATGGAAATGGATGATCAATATGCCCTCTCCGATCTCCGCCACCTCATGACTACACCTCCATCTCGCTCCCATTTCCCCTCTTCTTCCTCAATTCCCCACCATGATCTCTTCTCCTCTTCCTCCACTTCCTCCGCCGCCGCCGCCGCCGCCTTCCGCCACCACCACCACCACCATCATACCCCTTACGACCTCATCATGATGATGCCACGTGATACTCTCCCCGACTTCCGTTCCGATTCCGCTGCCACGCCCCCTGCCGTCGTCTCCGCTCCAACAGCTCCCACCGCCTTCGAACTCGAAACTGCCTCACTCGCTGCCGACTGCGCCACGCCCCGATGGCCTCGCCAGGAAACTCTCACTCTCTTGGATATCAGATCTCGACTCGATTCTAAGTTCAAAGAAGCGAACCAAAAAGGACCCCTTTGGGATGAAGTTTCAAGAATCATGGCTGAGGAACACAATTATCAAAGAAGTGGGAAAAAATGCAGAGAAAAGTTTGAGAATTTGTATAAATATTACAAAAAGACAAAGGAAGGCAAAGCTGGAAGACAAGATGGTAAGAACTACAGATTCTTCAGGCAGTTGGAAGCTCTCTATGGTGAAACAACCAATTCAGCTCAACTTCCAGATTCCCATTTTGTTGGAGACAGCAACCTCAGCTTCCAACAAAATGGGACTAACAATCCGAACACCGCTCTACCAATGAGCTACGAAGCTCAACAGAAGCATTACTGCGACAGCCTCAGCCTCTCTAACACGTCCGAGTTTGAAACCTCAGCCTCGTCGGATGACAACGATGACCTCGGCTCGGTTGGCATTATGGACAACGATTCGGTCGAGAAGAGACGGAAACGACGAGGCGGGAAATGCTGGAAGGCGAAGATCAAACAGTTTATCGACTCGCAAATGAGGAAGCTCATTGATAAACAAGAGGCTTGGTTGGAGAAGCTCATGAAAACTCTTGAACAAAAGGAAAAGGATAGAATGATTCGTGAGGAGGAATGGAGGAGACAAGAAGTGTCAAGAATGGACCGAGAGAGGAGCTTTTGGGCAAAGGAGAGAGCATGGATAGAGGCTAGAGATGCAGCATTAATGGAAGCATTGCAAAGGCTAACGGGACGAGAATTGAGAGACTACAACTCCTCGCCCGACCACGGATTAATCGCACCGGAGCGTCATCGGAATAACAGCGATAACCAAAACGAAGACGGGAGCGAAATACTAAACAACAACACCGGTAGAGAACTAGTAGACAACAATAATTACCAAAGGAAAACAATAGATGAAGGCAACAAGAAACGCAAGGAGAATTCAAGATCAGCCACCACCTACAATCTTTACTTCCAAACAGATTCCTCCCTCTACAGCGGCGGAGGACCTTGCGGCGGTGGTGCCGAGATCAAAGAACAAAGTCCAAACAGCTCGAACGCTGGCGGCGGGGGTGGCGGGGGCGGTGGCAGCCATGTGGTGCAAGATAGTTGCTTTCGGTTCTTGATGGGTGAAGGAGATCAGTCTCAATCTGGTTTGTGGGAAAATTTTGGTCTGAAACTCAACAATGGAAGTGACCAAAGTTGA 1575 49.46 MEMDDQYALSDLRHLMTTPPSRSHFPSSSSIPHHDLFSSSSTSSAAAAAAFRHHHHHHHTPYDLIMMMPRDTLPDFRSDSAATPPAVVSAPTAPTAFELETASLAADCATPRWPRQETLTLLDIRSRLDSKFKEANQKGPLWDEVSRIMAEEHNYQRSGKKCREKFENLYKYYKKTKEGKAGRQDGKNYRFFRQLEALYGETTNSAQLPDSHFVGDSNLSFQQNGTNNPNTALPMSYEAQQKHYCDSLSLSNTSEFETSASSDDNDDLGSVGIMDNDSVEKRRKRRGGKCWKAKIKQFIDSQMRKLIDKQEAWLEKLMKTLEQKEKDRMIREEEWRRQEVSRMDRERSFWAKERAWIEARDAALMEALQRLTGRELRDYNSSPDHGLIAPERHRNNSDNQNEDGSEILNNNTGRELVDNNNYQRKTIDEGNKKRKENSRSATTYNLYFQTDSSLYSGGGPCGGGAEIKEQSPNSSNAGGGGGGGGGSHVVQDSCFRFLMGEGDQSQSGLWENFGLKLNNGSDQS 524
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 1196989 1199544 - Carg03699-RA Car14g00256 160158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car14g00256 524 MobiDBLite consensus disorder prediction 421 439 - -
Car14g00256 524 MobiDBLite consensus disorder prediction 376 440 - -
Car14g00256 524 PANTHER TRIHELIX TRANSCRIPTION FACTOR PTL 420 511 - -
Car14g00256 524 PANTHER TRIHELIX TRANSCRIPTION FACTOR PTL 40 418 - -
Car14g00256 524 CDD GT1 111 177 - -
Car14g00256 524 Gene3D - 113 175 - -
Car14g00256 524 MobiDBLite consensus disorder prediction 18 38 - -
Car14g00256 524 MobiDBLite consensus disorder prediction 460 486 - -
Car14g00256 524 MobiDBLite consensus disorder prediction 401 420 - -
Car14g00256 524 PANTHER - 420 511 - -
Car14g00256 524 PANTHER - 40 418 - -
Car14g00256 524 Pfam Myb/SANT-like DNA-binding domain 111 198 IPR044822 -
Car14g00256 524 Coils Coil 307 334 - -
Car14g00256 524 MobiDBLite consensus disorder prediction 376 400 - -
Car14g00256 524 ProSiteProfiles Myb-like domain profile. 112 170 IPR001005 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car06g00394 Car14g00256 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car02g00715 Car-Chr2:5313359 Car14g00256 Car-Chr14:1196989 7.10E-18 dispersed
Car04g01484 Car-Chr4:8644007 Car14g00256 Car-Chr14:1196989 9.12E-84 dispersed
Car14g00256 Car-Chr14:1196989 Car18g00853 Car-Chr18:9572117 8.55E-86 dispersed
Car14g00256 Car-Chr14:1196989 Car06g00394 Car-Chr6:2143030 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
4610 PF13837 Myb_DNA-bind_4 1.40E-19 CL0123 Car TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car14g00256 - - cmos:111441376 986.482