Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car14g00257 ATGTCTTCCTCCGCCCGCCACCCCATCTACAAAGGCATTCGCCAGCGCACCACCGGCAAATGGGTCTCCGAAATTCGCGAGCCAAGGAAACCCAACCGAATTTGGTTAGGCACCTTCCCAACCGCTGAAATGGCCGCCGTCGCATACGACGTCGCAGCCCTCGCCCTCAAAGGCCAGGACGCCGAGCTCAATTTCCCCAATTCCGCTGCTTCTCTCCCTGTCCCTGCCTCTCGCTCTGCTTCTGATATTCAAGCTGCCGCCACATCCGCCGCCGCTGCACTTGGCGCAGCCGCCGCCGCTATGGAGGCACGCAATAATAACGGTCGCGGCCGTAGTAACTTCTCTGGAACTAATTCTTCGTACGGAACAAGATACAATGAAAATGAATTGGAAAATCAGTTCGTTGATGAAGATTTAATCTTCGATATGCCTAATGTTCTAATGAACATGGCCGAAGGAATGCTTCTTAGCCCTCCCCGTTTCAATGTCCACGGCAATGACGACCGCGACGACGGCGGTGATCAAAACCTTTGGAACTTTCCCTAA 546 54.03 MSSSARHPIYKGIRQRTTGKWVSEIREPRKPNRIWLGTFPTAEMAAVAYDVAALALKGQDAELNFPNSAASLPVPASRSASDIQAAATSAAAALGAAAAAMEARNNNGRGRSNFSGTNSSYGTRYNENELENQFVDEDLIFDMPNVLMNMAEGMLLSPPRFNVHGNDDRDDGGDQNLWNFP 181
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 1207041 1207586 + Carg03698-RA Car14g00257 160159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car14g00257 181 ProSiteProfiles AP2/ERF domain profile. 9 66 IPR001471 GO:0003700|GO:0006355
Car14g00257 181 Pfam AP2 domain 8 58 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car14g00257 Car-Chr14:1207041 Car16g00132 Car-Chr16:761641 1.90E-44 dispersed
Car18g01124 Car-Chr18:11208387 Car14g00257 Car-Chr14:1207041 2.17E-42 dispersed
Car14g00257 Car-Chr14:1207041 Car14g00258 Car-Chr14:1211184 2.21E-30 tandem
Car14g00257 Car-Chr14:1207041 Car06g00395 Car-Chr6:2176750 7.00E-72 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
4611 PF00847 AP2 2.00E-11 CL0081 Car TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car14g00257 - - csv:101203380 230.335