Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Car14g00298 | ATGTGGGCAAGCGCTGAAGGAGGGCCGCCGGAGGTTACTCTGGAGACTTCCATGGGTTCTTTCACCGTCGAGCTTTACTTCAAACACGCACCGAGGACATGTAGAAACTTCATTGAGCTTTCTCGGCGAGGTTATTATGACAATGTCAAATTTCACCGGATTATTAAGGATTTTATAGTGCAAGGTGGAGATCCCACAGGAACTGGACGGGGTGGGGAATCTATTTATGGGAAGAAATTTGAGGATGAAATAAAGCCAGAGTTGAAGCATACTGGAGCTGGTATTCTATCAATGGCAAACGCTGGTCCTAATACAAATGGAAGCCAATTCTTCATCACTCTTGCCCCTTGCCCATCCTTAGATGGGAAGCACTCCATCTTTGGAAGAGTTTGTAAGGGAATGGAAATAATCAAAAGGCTTGGCAGTGTACAAACTGATAACAACGATAGACCCATCCATGATGTGAAAATCCTACGGGCATCAGTTAAAGACTAA | 495 | 44.65 | MWASAEGGPPEVTLETSMGSFTVELYFKHAPRTCRNFIELSRRGYYDNVKFHRIIKDFIVQGGDPTGTGRGGESIYGKKFEDEIKPELKHTGAGILSMANAGPNTNGSQFFITLAPCPSLDGKHSIFGRVCKGMEIIKRLGSVQTDNNDRPIHDVKILRASVKD | 164 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 14 | 1431884 | 1435576 | - | Carg03657-RA | Car14g00298 | 160200 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Car14g00298 | 164 | PANTHER | PEPTIDYL-PROLYL CIS-TRANS ISOMERASE-LIKE 1 | 5 | 163 | - | - | |
| Car14g00298 | 164 | Gene3D | - | 3 | 164 | IPR029000 | - | |
| Car14g00298 | 164 | ProSitePatterns | Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. | 46 | 63 | IPR020892 | GO:0003755|GO:0006457 | |
| Car14g00298 | 164 | SUPERFAMILY | Cyclophilin-like | 11 | 162 | IPR029000 | - | |
| Car14g00298 | 164 | PIRSF | Peptidylpro_ismrse | 3 | 164 | IPR024936 | GO:0003755 | |
| Car14g00298 | 164 | Pfam | Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD | 12 | 161 | IPR002130 | GO:0000413|GO:0003755 | |
| Car14g00298 | 164 | ProSiteProfiles | Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. | 15 | 162 | IPR002130 | GO:0000413|GO:0003755 | |
| Car14g00298 | 164 | PRINTS | Cyclophilin peptidyl-prolyl cis-trans isomerase signature | 25 | 40 | IPR002130 | GO:0000413|GO:0003755 | |
| Car14g00298 | 164 | PRINTS | Cyclophilin peptidyl-prolyl cis-trans isomerase signature | 51 | 63 | IPR002130 | GO:0000413|GO:0003755 | |
| Car14g00298 | 164 | PRINTS | Cyclophilin peptidyl-prolyl cis-trans isomerase signature | 94 | 109 | IPR002130 | GO:0000413|GO:0003755 | |
| Car14g00298 | 164 | PRINTS | Cyclophilin peptidyl-prolyl cis-trans isomerase signature | 109 | 121 | IPR002130 | GO:0000413|GO:0003755 | |
| Car14g00298 | 164 | PRINTS | Cyclophilin peptidyl-prolyl cis-trans isomerase signature | 122 | 137 | IPR002130 | GO:0000413|GO:0003755 | |
| Car14g00298 | 164 | PANTHER | PEPTIDYL-PROLYL CIS-TRANS ISOMERASE-RELATED | 5 | 163 | IPR044666 | - |
Event-related genes
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| Car06g00431 | Car14g00298 | CST |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Car14g00298 | Car-Chr14:1431884 | Car14g01795 | Car-Chr14:14033684 | 2.86E-47 | dispersed | |
| Car11g01655 | Car-Chr11:12997269 | Car14g00298 | Car-Chr14:1431884 | 7.79E-27 | transposed | |
| Car12g00717 | Car-Chr12:6083106 | Car14g00298 | Car-Chr14:1431884 | 9.12E-53 | transposed | |
| Car14g01715 | Car-Chr14:13599014 | Car14g00298 | Car-Chr14:1431884 | 2.61E-06 | transposed | |
| Car14g00298 | Car-Chr14:1431884 | Car06g00431 | Car-Chr6:2395804 | 6.50E-121 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Car14g00298 | K12733 | - | csv:101222111 | 332.798 |