Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car14g00304 ATGTCTATAAACCACTTCTCTCAAGACTTCCATCAGCCCCTCTTCTCATCTCCCCACCTCCCCATCATGCTTAGTAATAACCCCAAATCCTCCCTCTCTGACCACCTCAAGCAGCCCATGTTCGAGAAGCCCTTAACCCCCAGCGACGTTGGGAAACTCAACCGCCTCGTTATCCCCAAGCAGTATGCGGAGAGATACTTTCCCCTCTCACCCTCCTCCTCCTCCGCCGCCGCCGCCACTGCCCACTCGGCTGACAAGGCCTTGCTTCTCACCTTTGAAGATGAGTCTGGAAAGCTGTGGCGCTTTCGTTACTCTTATTGGAATAGTAGCCAGAGCTATGTGTTGACTAAAGGCTGGAGCCGCTTTGTCAAAGAGAAGCGCCTTGACGCTGGTGATTGCGTCGTTTTTGAACGCCACCGCTCTGATGGCGACAGGTTGTTCATTGGCTGGAAACGCCGCTCGGCGCCCTCTCCGGCGGAGACTGCTGTGGCGCCAAGTGGCAGTGGCGGTGGGTGTTGGACTAGAATGTTCTACTCTGCAAACCCATATCCTTCTCATCATCATCTTCCTTCACCGCCATACCAATCTTCGGGTTCTACTCTTCCAGAGTCCTCTTTTCAGAGTCAAACAGTGTCGGTTGGGAATTCAAAGATACTGCGGCTGTTCGGGGTGGACTTAGAGTGCCAAACCGACATGTCGGAACCTGAACCACCGTCGACGGTCGGAGGCGTGTCAAGTATATCGGGTCGGGATCCGACCCGCCACATTTTCTACTCACATTATTCTTCTGCCGTTCCTCATCACATGGATTTCACTTCCCCACAAGATGTCAAGCAGACGAAATATCAAGGATAG 855 53.1 MSINHFSQDFHQPLFSSPHLPIMLSNNPKSSLSDHLKQPMFEKPLTPSDVGKLNRLVIPKQYAERYFPLSPSSSSAAAATAHSADKALLLTFEDESGKLWRFRYSYWNSSQSYVLTKGWSRFVKEKRLDAGDCVVFERHRSDGDRLFIGWKRRSAPSPAETAVAPSGSGGGCWTRMFYSANPYPSHHHLPSPPYQSSGSTLPESSFQSQTVSVGNSKILRLFGVDLECQTDMSEPEPPSTVGGVSSISGRDPTRHIFYSHYSSAVPHHMDFTSPQDVKQTKYQG 284
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 1460244 1462846 - Carg03651-RA Car14g00304 160206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car14g00304 284 ProSiteProfiles B3 DNA-binding domain profile. 41 154 IPR003340 GO:0003677
Car14g00304 284 Pfam B3 DNA binding domain 41 153 IPR003340 GO:0003677
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car14g00304 Car-Chr14:1460244 Car16g00537 Car-Chr16:3397351 1.10E-47 dispersed
Car14g00304 Car-Chr14:1460244 Car06g00437 Car-Chr6:2421078 1.03E-61 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
4617 PF02362 B3 9.90E-30 CL0405 Car TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car14g00304 - - csv:101214938 417.927