Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car14g00330 ATGGCGACCTACCTTCATGCCAATTCTGATCACTTCCAGTCTCCTGATGCTGCCCTTCAAACCCTCGTTTTAAGGAACCCAACCTATGTCCAATTCTCCGACACTCCGCCGCCGCCTCCTCCTCCTCCCTCGCACCCTAATCTCCTTTTCTTCAATTCCCCTGCTTCTGCCCCTGCTGCTGCGAATTCCTTCTCTACACAGCAATTCGTTGGAATCCCCACGTCCCAAGATAACAATTCCCATTCCTTGAACCCCCACCATGATATCTCCGCCTTGCACGGCTTTCTCCCTCGTGTTCAACCCAATATTTGGAATTCAATTGACACTTCCACGGCGGCGCGTGATTCTTCACGCGCTCAGCAGGGTTTGTCGTTGAGTCTCTCTTCGCAACACCCTCCTGGTTTTGGGTCGAGAGATGTTGTTCAATCGCATACCCAGCAGGCGGTTTCTGGTGAGGAGACTCTGCGGATCTCTGGTGGATCGTCTTCTTCGGCTTCTGGTGTTACCAATGGCGTTGCTGGAATTCAGGGTGTTTTAATTAGCTCTAAGTATCTCAAGGCTGCGCAAGAACTTTTAGATGAGGTTGTCAATGTTAGCCAAAATGGAATTAAGAACGAATCGTCTCCCAGAAAGGGAAACGGACATCAAACTAAGATGAACGGAGATGCATCCGCTGCTACTGGAACTGCTGACGGTTCCTTAGAAGGTGAAGCCGATGGTAAACGCGCCGTCGAGCTCACCACCGCCGAGAGACAAGAAATTCAGATGAAGAAAGTAAAGCTTATTAGCATGCTTGATGAGGTGGGGCAGAGGTACAGACAGTACCACCACCAGATGCAGATAGTGATATCCACTTTCGAGCAGGCGGCCGGCGCCGGGTCGGCGAGAACCTACACGGCCCTTGCACTTCAAACGATCTCAAAGCAATTTCGCTGTTTAAAAGACGCCATCGCCGGCCAAATTCGAGCAGCCAGCAAGAGCTTGGGTGAAGAAGAATGCGTCGGAAAAAAAATGGAAGGTTCCCGGTTGAAATTCGTCGATAACCATCTCCGGCAACAGCGGGCTCTGCAACAATTGGGTATGATCCAACACAATGCTTGGAGACCCCAGAGAGGCTTACCGGAGCGCTCTGTTTCGATTCTTCGCGCTTGGCTTTTCGAACACTTCCTCCACCCTTACCCTAAGGATTCGGATAAACACATGCTCGCCAAGCAAACAGGGCTCACCCGAAGCCAGGTTTCGAATTGGTTCATAAACGCGAGAGTTCGGCTATGGAAGCCAATGGTGGAAGAGATGTACATGGAAGAAATCAAGGAGCAAGAACAGAACGGAGGTGGATCGACACCGGCGACGGTGGGGGAAAGAAACAACGAAGATTCAGTTTCAAAGTCCATGGAGACAAAAAGCCCCAATTCAAAACAAGAGAATTCCCCGAACCAAAACGTTCATCCTTCAGTTTCAATTTCAAATTCCTCCGGGGGAAATGTCCGAAACCCATCTGGGTTTACACTAATTGGAACCTCATCGGAGCTGGATGGAATCACTCAAAGAAGCCCCAAAAAACAGAGAGGCCCCGAAATCCTCCATTCCTCAGACAACAGCGTGGCGTTCATAAACATGGACATCAAACCCCGAGAAGAAGGAGAAGGACAGAATCAACAGAATCAGAACCAAAATCACGATGTACCAATGAAATTCGACGAGGAGAGACAAAACAGAGATGGGTATTCATTTCTAGGCCAACCCCATTTCAACCTCGGCGGATTCGGGCAATACCCAATAGGGGAAATGGCGAGATTCGAGGCGGATGAGTTCACTCCAAGATTCTCCGGCAACAATGGCGTGTCTTTGACTCTAGGGCTTCCCCATTGCGAAAATCTGTCCTTAAACGCGGCAACCCACCAAAGGTTCCTCCCAAATCAGAGCATCCAATTAGGAAGAAGAACGGAAATTGGAAAAGCCGCCGATTATTCCGCCATGAACGCCTCCACAACAGCTCACTCCTCCGCCGCCTTTGATACCATGAACATCCAAAATGGAAAACGTTTCGCCGCCCAGTTACTGCCGGACTTCGTGGCCTAA 2082 50.0 MATYLHANSDHFQSPDAALQTLVLRNPTYVQFSDTPPPPPPPPSHPNLLFFNSPASAPAAANSFSTQQFVGIPTSQDNNSHSLNPHHDISALHGFLPRVQPNIWNSIDTSTAARDSSRAQQGLSLSLSSQHPPGFGSRDVVQSHTQQAVSGEETLRISGGSSSSASGVTNGVAGIQGVLISSKYLKAAQELLDEVVNVSQNGIKNESSPRKGNGHQTKMNGDASAATGTADGSLEGEADGKRAVELTTAERQEIQMKKVKLISMLDEVGQRYRQYHHQMQIVISTFEQAAGAGSARTYTALALQTISKQFRCLKDAIAGQIRAASKSLGEEECVGKKMEGSRLKFVDNHLRQQRALQQLGMIQHNAWRPQRGLPERSVSILRAWLFEHFLHPYPKDSDKHMLAKQTGLTRSQVSNWFINARVRLWKPMVEEMYMEEIKEQEQNGGGSTPATVGERNNEDSVSKSMETKSPNSKQENSPNQNVHPSVSISNSSGGNVRNPSGFTLIGTSSELDGITQRSPKKQRGPEILHSSDNSVAFINMDIKPREEGEGQNQQNQNQNHDVPMKFDEERQNRDGYSFLGQPHFNLGGFGQYPIGEMARFEADEFTPRFSGNNGVSLTLGLPHCENLSLNAATHQRFLPNQSIQLGRRTEIGKAADYSAMNASTTAHSSAAFDTMNIQNGKRFAAQLLPDFVA 693
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 1571650 1574864 + Carg03625-RA Car14g00330 160232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car14g00330 693 Pfam Homeobox KN domain 384 423 IPR008422 GO:0003677|GO:0006355
Car14g00330 693 MobiDBLite consensus disorder prediction 438 535 - -
Car14g00330 693 MobiDBLite consensus disorder prediction 202 227 - -
Car14g00330 693 Pfam Associated with HOX 178 318 IPR006563 -
Car14g00330 693 MobiDBLite consensus disorder prediction 441 515 - -
Car14g00330 693 MobiDBLite consensus disorder prediction 202 240 - -
Car14g00330 693 ProSiteProfiles 'Homeobox' domain profile. 364 427 IPR001356 GO:0003677
Car14g00330 693 MobiDBLite consensus disorder prediction 115 168 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car06g00463 Car14g00330 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car02g00241 Car-Chr2:1634715 Car14g00330 Car-Chr14:1571650 1.18E-109 dispersed
Car02g00391 Car-Chr2:2948817 Car14g00330 Car-Chr14:1571650 3.10E-86 dispersed
Car12g00582 Car-Chr12:3883564 Car14g00330 Car-Chr14:1571650 1.04E-45 dispersed
Car14g00330 Car-Chr14:1571650 Car20g00709 Car-Chr20:4092444 3.89E-104 dispersed
Car14g00330 Car-Chr14:1571650 Car02g01093 Car-Chr2:7586077 4.29E-149 wgd
Car14g00330 Car-Chr14:1571650 Car06g00463 Car-Chr6:2556492 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
4620 PF07526 POX 3.10E-48 No_clan Car TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car14g00330 - - csv:101208201 1081.63