Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car14g00335 ATGAACGATTTGTTCTCTTCTCGCTCTTTCTCCCGCGACAGCCATGTCGTTGAGATGGGCAACGCCTCCTCTTCCCCCACTGCTGTTAATCTCGATAAGTTCTTTGAAGATGTTGAGTCCGTTAAAGATGAACTGAAGGAGCTTGATCGACTCTGCAGCAAACTCCATGACTCCCATGAACAGAGCAAGACGCTTCACAATGCTAAGGCTGTCAAAGACCTCCGATCTCGTATGGATTCCGATGTTTCTCTTGCCCTCAAGAAGGCCAAACTCATTAAGGTCCGATTGGAGGCTCTTGATCGCTCCAATGCCGCCAATCGGAGCCTCCCCGGTTGCGGCCCTGGTTCCTCTTCTGATCGGACTCGGACTTCTGTAGTCAACGGCTTGAGGAAGAAATTGCAGGATTCCATGGAGAGCTTCAACAATCTCAGGCAACAGATCTCCTCCGAGTACAGGGAGACCGTTCAGCGAAGATATTTCACTGTTACTGGTGAAAATCCGGACGAGAAGACCATTGACATATTGATATCTACAGGTGAAAGTGAGACATTTTTGCAGAAAGCCATTCAAGAACAAGGCAGAGGCAGAATCTTAGACACCATTAGCGAGATCCAGGAGAGGCATGATGCTGTAAAAGACCTGGAAAAGAACCTCAAGGAGCTGCACCAGGTTTTCATGGACATGGCAGTCTTGGTGCACGAGCAAGGTGAGAAACTCGACGACATCGAGAGCCACGTGAACCGTGCTCATTCTTTTGTTCGAGATGGAATGTTCAAAGGAATCTACCACGGGAAGCAATACCACGCGGCTGACATAGCAGCTGTATTGAGCAGGGCTTGGAGTGCTGGCGTTCAGCGAATCATTGTGACTGGTGGATCACTCGAGGAATCAAGGGAGGCCCTTAAAATTGCAGAAACAGATGGTACTGGGTTATCTGTGTTTCTCTTGGTTCAACTTGTTTTTCTTGTAGGAAGGCTTTTTTGTACTGTGGGTGTGCATCCAACAAGATGCAAGGAATTTGAAGAGAGTGGTGACCCAGAAACGTATTTTCAGGCTCTTCTTTCATTGGCCAAAGAGGGAATTGAGAAAGGAAAGGTCGTTGCAGTTGGTGAATGTGGATTAGATTATGATAGGCTTCACTTTTGCCCTGCCGATATTCAAAAGAAATATTTCGAGAAGCAGTTTGAATTAGCACACGCAACAAAGCTTCCTATGTTTCTACACATGCGTGCAGCTGCTGAAGATTTTTGTGATATTGTAGAGCGAAATAAGCAAAGGTTTTGTGCTGGAGTTGTTCATTCTTTCACAGATAGTGCAGAAGATCGTGACAGGCTTCTGGCATTCAGTAATTTGTACATAGGGATTAATGGTTGCTCTCTGAAAACTGCGGAAAACCTTGATGTCGTGAAGGGTATACCAATTGAGAGATTGATGATTGAGACGGACTCTCCGTATTGTGAAATCAAGAATACACATGCTGGGATTAAGTTTGTTAAGTCTGTCTGGGCTTCTAAGAAGAAAGAGAAGCATGACGAGCAGTGCATAGTGAAAGGCCGGAATGAACCATGTTTAGTTCGGCAAGTTCTTGAGGTCTTGGCTGGATGCAAAGGCATTGCAGATATCAATCAGCTTAGTGAAACTTTGTACCACAATACTTGCAGAGTTTTCTTTCCTCAAGACCTAGACTCTGCAGCAGATGCTCTCCTTGCTGGTTCTCAAGTTCTTGATGAAAAAAATTAG 1740 45.46 MNDLFSSRSFSRDSHVVEMGNASSSPTAVNLDKFFEDVESVKDELKELDRLCSKLHDSHEQSKTLHNAKAVKDLRSRMDSDVSLALKKAKLIKVRLEALDRSNAANRSLPGCGPGSSSDRTRTSVVNGLRKKLQDSMESFNNLRQQISSEYRETVQRRYFTVTGENPDEKTIDILISTGESETFLQKAIQEQGRGRILDTISEIQERHDAVKDLEKNLKELHQVFMDMAVLVHEQGEKLDDIESHVNRAHSFVRDGMFKGIYHGKQYHAADIAAVLSRAWSAGVQRIIVTGGSLEESREALKIAETDGTGLSVFLLVQLVFLVGRLFCTVGVHPTRCKEFEESGDPETYFQALLSLAKEGIEKGKVVAVGECGLDYDRLHFCPADIQKKYFEKQFELAHATKLPMFLHMRAAAEDFCDIVERNKQRFCAGVVHSFTDSAEDRDRLLAFSNLYIGINGCSLKTAENLDVVKGIPIERLMIETDSPYCEIKNTHAGIKFVKSVWASKKKEKHDEQCIVKGRNEPCLVRQVLEVLAGCKGIADINQLSETLYHNTCRVFFPQDLDSAADALLAGSQVLDEKN 579
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 1634408 1643029 + Carg03619-RA Car14g00335 160237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car14g00335 579 Coils Coil 204 224 - -
Car14g00335 579 Coils Coil 126 150 - -
Car14g00335 579 Pfam TatD related DNase 269 556 IPR001130 GO:0016788
Car14g00335 579 Pfam Syntaxin 33 236 IPR006011 GO:0016020
Car14g00335 579 ProSitePatterns Syntaxin / epimorphin family signature. 207 246 IPR006012 GO:0005484|GO:0006886|GO:0016020
Car14g00335 579 ProSitePatterns TatD deoxyribonuclease family signature 2. 404 414 IPR018228 -
Car14g00335 579 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 201 256 IPR000727 -
Car14g00335 579 Coils Coil 31 58 - -
Car14g00335 579 ProSitePatterns TatD deoxyribonuclease family signature 3. 468 484 IPR018228 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car13g00552 Car-Chr13:7435500 Car14g00335 Car-Chr14:1634408 4.65E-107 dispersed
Car14g00335 Car-Chr14:1634408 Car18g00320 Car-Chr18:1958807 7.22E-110 dispersed
Car06g00469 Car-Chr6:2594918 Car14g00335 Car-Chr14:1634408 6.30E-11 transposed
Car14g00335 Car-Chr14:1634408 Car06g00468 Car-Chr6:2592637 5.60E-162 wgd
Car14g00335 Car-Chr14:1634408 Car07g00809 Car-Chr7:4283931 8.16E-130 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car14g00335 K03424 - csv:101209174 592.038