Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car14g00376 ATGGAGTTAGCTTTGAGCCTCGGCGATGCGCCCATTTCCAATAAGCCATTTGGGCATCTCTCTAATGGCGTTTCTAAGCTCTCCTCTTCTTCTACTTCCTCTCTAATGGCTTTAGGGTTTTGTGTCGGTTTGGCTCATGATTCCGGTTCCGGTTCCGGCTCCGGTTCGCCTTCTGGTTCGGTTCACGACGACGACGATGAAGAAGAAGATGATAATCATGATCGGAAAATGGTTCTTTCCGGTTCGGAAACGCCGGTTCAGCTGGATCTTCTTCCTTCAGCTCCCGTTCCTCGTTCTTCTCATCTCCGATTTCCATGGCTTTCCGATCACTTAATCCCAGAAGGAGAAGAAAGGGTAGCGCTGGATGTAAACCGCCGCCCTGCGTTGGCGGCTGCGGAGGAGACAGAAGACAGGGCGGCGGTGACGGCGGCGTTGTCATCTCCGAACAGTACGGTTTCGTCTTTCCAGATGGATTTTGGGGTCAGAGCTTCCTCAAGAATCAGCGACGATGAAGAAAATGGGTCTGCAAGAAAAAAGCTTCGGCTTTCTAAAGATCAATCGGCTTTTCTTGAAGAAAGCTTCAAAGAACATAGCACTCTCAATCCAAAGCAGAAGCTAGCACTAGCCAAGCAGCTCAACCTCCGACCAAGACAAGTGGAAGTTTGGTTCCAAAATAGAAGAGCTAGGACAAAGTTGAAGCAGACAGAAGTAGATTGTGAGTATTTAAGGAGATGTTGTGAGACATTGACAGAAGAGAACAGAAGATTACAAAAGGAGCTTCAAGAATTAAGAGCTTTAAAAACATCTCAGCCCTTTTACATGCAGCTTCCGGCCACCACTCTCACCATGTGTCCGTCGTGCGAGCGCGTCGCCACCGCCACTCCCGCTGCCTCCGTTGCCACCAAAACCACCGTCACCGTCGCCACCACCGCCCCCAACCCAGCCGCTCTATGCCTTGCAAACAAGGCGAGGATCTTGCCATTTCCTCATTTGCATCAAGCTGCCTCATAA 1011 50.25 MELALSLGDAPISNKPFGHLSNGVSKLSSSSTSSLMALGFCVGLAHDSGSGSGSGSPSGSVHDDDDEEEDDNHDRKMVLSGSETPVQLDLLPSAPVPRSSHLRFPWLSDHLIPEGEERVALDVNRRPALAAAEETEDRAAVTAALSSPNSTVSSFQMDFGVRASSRISDDEENGSARKKLRLSKDQSAFLEESFKEHSTLNPKQKLALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEYLRRCCETLTEENRRLQKELQELRALKTSQPFYMQLPATTLTMCPSCERVATATPAASVATKTTVTVATTAPNPAALCLANKARILPFPHLHQAAS 336
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 1884739 1886272 - Carg03578-RA Car14g00376 160278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car14g00376 336 ProSiteProfiles 'Homeobox' domain profile. 173 233 IPR001356 GO:0003677
Car14g00376 336 MobiDBLite consensus disorder prediction 48 74 - -
Car14g00376 336 Pfam HD-ZIP protein N terminus 120 155 IPR006712 GO:0005634
Car14g00376 336 Pfam Homeobox associated leucine zipper 233 267 IPR003106 GO:0006355|GO:0043565
Car14g00376 336 Pfam Homeodomain 177 231 IPR001356 GO:0003677
Car14g00376 336 Coils Coil 239 269 - -
Car14g00376 336 ProSitePatterns 'Homeobox' domain signature. 208 231 IPR017970 GO:0000981|GO:0006355
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car06g00089 Car14g00376 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car01g00185 Car-Chr1:1013013 Car14g00376 Car-Chr14:1884739 9.08E-62 dispersed
Car08g00467 Car-Chr8:2988310 Car14g00376 Car-Chr14:1884739 4.80E-95 dispersed
Car09g00270 Car-Chr9:1477720 Car14g00376 Car-Chr14:1884739 6.08E-61 dispersed
Car14g00376 Car-Chr14:1884739 Car16g01059 Car-Chr16:9103007 2.64E-74 dispersed
Car14g00376 Car-Chr14:1884739 Car17g00882 Car-Chr17:7382958 1.57E-104 wgd
Car14g00376 Car-Chr14:1884739 Car06g00089 Car-Chr6:617525 2.96E-118 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
4624 PF00046 Homeodomain 1.20E-15 CL0123 Car TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car14g00376 K09338 - csv:101222778 358.992