Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car14g00377 ATGATATGGAATCGAGAGCAGTCGTCTGAGGCAGAGCCGCTTTCGAACTCGGTTCTTCAAATTGAAGACGTGAATTTAGCTGATTTGACTGAGGATCCTGTTCATAGATTTGGGGAAGCTATCAGGTTTAGGACGAGACAGCGGTGGCGAAGGCGTCAAGTCCAAATTCCTTCTGAGACTCAGAATATTACAATGGAATTGAGTGAAATCATGGTCAATTCAGGCAATGGGAATACATTGCAGCCATTACAGGCTGGTGAGGGCAGTATCACTGCTGAGGAAAGGAAGAACGAAGCGGGGAAAACATGTGAAATCAACAATGAAGCTCTGGAAGATGAAAAGACAGAGAATAAGAGTGATGTTGAAAAGGGCAGTGATTCTGATGGGAGTTTCTTTGATTGTAATATATGTCTGGATTTGGCTAGGGACCCTGTTGTAACTTGTTGCGGTCATCTATACTGTTGGCCGTGCCTTTATCGATGGTTACATCTACATTCAGATGCCAAGGAATGCCCTGTATGTAAAGGAGAGGTCACTACAAAAAACGTAACTCCGATCTATGGGCGTGGCGGTAATACCCCTGTGACAGAGGAGGATGCTACACTTAAGATTCCTCTAAGGCCCCACGCTCGGAAAGTTGAAAGTTTGAGGCAAACCATCCAGAGGACTGCATTGAGTTTCCCAGTGGAGGATATGATTCGTCGATTGGGAAACAGATTTGATTTTAATCGTGACCATGACCAACCGCCCGAACCAGACAGCTCACACGAAACCTTTGGTAGATCTCCAACCTTGTTGAATAGGCTTTTAACATCCAGGGGAATTCGTAGAGAACAAATTTCACTGCCCCCCAATGATGATGTAGGAGATTTAGCACACGCCGATGTGTCTGGCATTGAGACTGGGGAAACCCGTCTTCAGTCTCTCCCCGTGCTTCGATCATTACTCCACCGGACAAGAGTTTCTTCTCTTACTTCTGCATTTAACTCCGCTGATAGGCTTCCAGATGGTCTTCTATATACCGATCCGCTCATTCCTAGAATTCAAGAGCAGCAGCCTCCTCCACCTGTTGAGGATAGAGATTCATTCTCTAGCATTGCTGCTGTTATCAATTCAGAGAGTCAAATGGACACTGCTGTAGAAATTGATTCCATGGTCTCCATTTCAACTTCATCCTCCAGAAGGAGAACTGATGCCTTACAGGTTTCTGATGTCGACAGTGGAAACTCTCGGGCACCCAGACGGAGAAGATTGGCTTGA 1260 45.79 MIWNREQSSEAEPLSNSVLQIEDVNLADLTEDPVHRFGEAIRFRTRQRWRRRQVQIPSETQNITMELSEIMVNSGNGNTLQPLQAGEGSITAEERKNEAGKTCEINNEALEDEKTENKSDVEKGSDSDGSFFDCNICLDLARDPVVTCCGHLYCWPCLYRWLHLHSDAKECPVCKGEVTTKNVTPIYGRGGNTPVTEEDATLKIPLRPHARKVESLRQTIQRTALSFPVEDMIRRLGNRFDFNRDHDQPPEPDSSHETFGRSPTLLNRLLTSRGIRREQISLPPNDDVGDLAHADVSGIETGETRLQSLPVLRSLLHRTRVSSLTSAFNSADRLPDGLLYTDPLIPRIQEQQPPPPVEDRDSFSSIAAVINSESQMDTAVEIDSMVSISTSSSRRRTDALQVSDVDSGNSRAPRRRRLA 419
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 1896660 1899041 - Carg03577-RA Car14g00377 160279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car14g00377 419 MobiDBLite consensus disorder prediction 388 419 - -
Car14g00377 419 Pfam Zinc finger, C3HC4 type (RING finger) 134 179 - -
Car14g00377 419 ProSitePatterns Zinc finger RING-type signature. 149 158 IPR017907 -
Car14g00377 419 MobiDBLite consensus disorder prediction 240 263 - -
Car14g00377 419 ProSiteProfiles Zinc finger RING-type profile. 134 175 IPR001841 -
Car14g00377 419 MobiDBLite consensus disorder prediction 240 254 - -
Car14g00377 419 MobiDBLite consensus disorder prediction 388 408 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car14g00377 Car-Chr14:1896660 Car12g00466 Car-Chr12:2941124 1.45E-27 dispersed
Car11g01267 Car-Chr11:10505168 Car14g00377 Car-Chr14:1896660 3.39E-07 transposed
Car14g00934 Car-Chr14:5640241 Car14g00377 Car-Chr14:1896660 1.07E-36 transposed
Car14g00377 Car-Chr14:1896660 Car06g00088 Car-Chr6:608594 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car14g00377 K10666 - csv:101220497 713.375