Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car14g00396 ATGCTCCAACAGCGTCTGTTTGGGTATTTTAATGTCGTTTTCTATTTGACGATTCTGACATCGCTGGCTAGGGCCTTCACTAATCCGTCGGATGTTGCAGCTCTTCAGGATCTGTACAGTGCCATGAACTATCCACTAGAGCTTAAAGGATGGAGAAAAGAAGGTGGAGATCCTTGTGAGGAATCATGGACTGGAGTGTCTTGCTCCGGTTTCTCTGTAATGTACCTTAAGCTCCATGGACTAAATCTCACTGGGAATCTTGGAGGACGGCTCAACAATCTCATAAATTTGAAGCAAATGGATGTTAGCTCTAATAGACTTACGGGTGAAATTCCGCACAACTTGCCTCCTAATGCGACTCATATAAATATGGCATTTAACCGTTTAAGCAAAAATCTTCCACATACTTTATCTTACATGGGAAATCTCCGACATATAAATCTGAGCCATAATACTCTATCTGGTGTGCTTGGAAATGTGTTTGCTGGTTTACAGAATTTGAGAGAGATGGATTTATCATATAATGACTTTGCTGGAGATTTGCCAAATTCCTTCAGTTCTCTGACGAACATCACTAGACTGATTGGGAGCAATAGGCTTCGTCCACAAGTAAATTCTCCACCCTGGGATTTTCCCCTGGGAAAAGATCCTATAGTGCAGAACATCAGTGGTCCTCCAACAACCAAGTCAAACGCCATCCAGAATTATCCCTCTCGTGGTGCCGTGAGGCATGAGAAGAGAAGGCATGGTTCTGGTGGAATAGGTCTCCTGGTAGGAGGAGTGACACTAGTAGTAACCTTTGCAGCTCTCTTTGTCGTATTTTCCATGAAGAAAGTTCATGAAAAGAAAATAAATTTGAAGATTACCAATACGTTACCTCGTTCTCTTTCTCTGGGCAAAACTGAAGATGGTTCGTCAACTGCACCAGAAGAAGGCTCACAAAGCTTGCCCCTGAGTTCTCAATTCATGAGCTGTCCAAGGCCTATACCTATATTAAATCACACGAGAACCGAGAAATTTTCAGGAAGAAAAGGTTTCTCAAACAGATGTAGGCTCCCAGTGAGAACAAAAATTTACACCCTGGCAGAGGTTCAATCTACTACAAACAACTTTAGTCAAGAGAATCTTCTGGGAGAGGGATCTCTTGGTGCTGTTTATAGAGCTGAATTTCCTGATGGCCAAGTTTTGGCAGTAAAAAATCTCAACATGGGAGCTCTCTCGTTTACAGAAGAAGAGCAATTTCTGGATGTGGTATGGACTGCTTCCCGTTTGGGGCACCCGAACATTGTTACGCTGCTTGGATATTGTGTAGAGCATGGACAACATATTCTCGGATATGAATACGTTCGAAATCTGTCTCTTGATGACGCTTTACACTGTGAAGCATACATGCCTCTGTCATGGACTGTCCGGCTCCAGATTGCTCTTGGAGTTGCTAGGGCTTTAGATCTGAAGGCTGCCAACATCTTACTTGATGAAGAACTGATGCCTCGTATTTGTGATTGTGGGCTGTCTGTTTTGAGGCCATTTGTGACCAATGGAGTTAAAACGAAGGCTTCTGAGATTGTCAGCGGTGACATAGGCTACCTTGCACCTGAACATGGGCAGCCAGGATTTGATAATACTAGAAGTGACGTGTATACCTTTGGAGTATTGCTTTTGGAGCTTGTCACAGGAAGAAAACCATTTGACAATTCGAAACCGAGGGAAGAGCAATCGCTGGTGAAATGGGCTTCATCTCGGCTTCATGACAACGAGAGTTTAGAACAGATGGTTGATCCAAGCATTAAAGGAACATTTTCCTCTAAGTCCCTCTCACGCTTTGTCGATATCATCTCCCTTTGTATACAGCCTGCGAAGGAATTCCGACCGCCAATGTCCGAAATAGTGGAACATTTAACGAATCTTCAAAGGAAGATGGAGATGGCCAAACGTGCTGCTATAGAAGGAACTGAAGTGGATCTTTTTGAAAAATCATTTCGTTCTACCAACACTGGCTACTCTCAGTTTACACTCCGCTCTGCTCTGCTTTCTTTGGACCTTTTGACGTTCTTTACTGCTCGAAAATCTACGAGAAGCAGTTCGACTGACCCGAAATTTCTACATTCCTCGTTACATTTCCGCTCTGCTCTGCTGATTCGTTTTGCGGATTGGTTGGTATACGATTGGCATTCTGAATTTGACTGTTTGTCATTTGGTATTCTGAATTCTGAATGTTTGTTTTGTTCTGTTTTAGCGATTGAAGAAAAAACGTCTAAACTGGTGGTGATCTCTCAAGAAATGGCCCACCTCCGTGCGGTAATGTATTTCAGTGTCATTGTCTTCTTGGCGACTCTGACTTCAGTCGTTCAGTGCTTTACTGACCCGCAGGATGTTTTAGCTCTTCTCAATCTGTATAGTACCCTAAACTACCCACCTGAGCTTAAAGGATGGAGAACAAATGGTGGGGATCCTTGCGGTGGAACGTGGACTGGGGTGTTTTGTGTTGGTTCATCTGTAATAGACCTTAAACTTAATAGATTAAACCTTTCTGGGAATCTTGGAGACCAGCTTTATCTTCTCCATAATTTGAAGCGACTGGATGTTAGCTGCAATAAAATTCTGGGTGAAATTCCTTCCGGGTTACCCCCGAATGTCACTTATATGAATCTAAGCCATAATGTGCTATCTGGCCCCATTGCAAATGTTTTTTCTGGCCTACAAAATCTTGTGGAGATGGATCTGTCATATAACAACTTCACTGGAGATTTATCAAATTCATTTGCTGCTCTGACTAATATCAATAGACTGATTGGGGGAAATGGGTTCGATGTAAGTAAATCTCCACCCTGCGATTTTTCCTTGGAAAAAGCACCTTTGACGTACAACAATAGCAGGCCTCCATTAACTGAGTCAATTACCATCGAGAAATGTCCCTACAAGAAAAAGGTTGGGAAAAAGGGGGGGAAATTAGGTCCTGGTGGAATAGCTATAGTGGCTGGTGGAGGTGGTTTTGTGATAATCCTTGCAGCTCTATTTATTGCAATCTGCAAGACTCAAATATGTGCAAAGAAAGGGAGCGTGAAGCACGTAAACATGTCTCTTCCAATCAGCACAGCTGCAGTTATTCCACCAGATGATAGTCCAAATATCTTGCCTCTCGGTTCTCCAGTCATAGGTGGCGGTCCAAATTGTGCCTGTTCTACTCGTCATGCCAGAACTGAGAGGGCATATGGCAGAAGAAGTTTCTCTAGGAGATCCAGGTTCCCAGTGAAAACAAAAACTTACACCGTGACTGAGCTTGAGTCTGCTACTAAGAAGTACAGTGAAGAAAACCTTCTTGGAGAGGGATCTCTTGGTTCTGTCTATAAAGCTGAATTTCCCGATGGCCAAATTTTGGCTGTGAAAATGGTTGATATGGCAGCACTCTCTTTCACAGAAGAACAACAGTTTTTGGATGTGGTCTGCACTATTACTCGTTTGAGGCACCCTAACATTGTTAGTCTTCTTGGATACAGTGTAGAGAATGGGCAACATCTACTAGCCTATGAGTATGTCGGGAATCTGTCTCTTGATGATGCTCTGCACAGCGTCGGACAAAACCCTCTATCGTGGAGTGTTCGACTCCAAATTGCTCATGGAGTTGCCAAGGCTTTGGATTACTTGCATAATGCTTTTTTCCCCCCATTGGCGCACTTCAATTTGAAGGCCGCCAACATCATGCTTGATGAAGAATTAATGCCGAAGATTTGTGACTGTGGTTTGTCTGTTTTGAAGCCTCTTGCTGCTCAAATAGCTATTGCTGATACTGGCTACTTTGCACCTGAATATGGCCAGTCTGGGATTGATTATACCAAAAATGATGTGTATGCATTCGGTGTATTGCTTTTGGAGCTTATTACAGGAAAAAAACCGAATGATTTGAGACCAGGGATCGAGCAATCTCGGTTAAGACGGGCGTCATTTCAGCTTCACGATTGTGGGAGTCTAGACGAGATTATCGATCCTGATATTAAAGGAACAATATCCTCCAAGGTTCTCTCTCGCTATGCTGATATTATCACCCTTTGTATACAGCCTGTAACGAAGCGTCGGCCTCCTATGTTCGCCATTGTCGGGTACCTGACAAGTATTCGGAGAAGGGTCGAGATTGAAAAACGTGCTGCAGTAGTAAGTAAAGCAATCGACACCTTTGAGAAATCCTTCCATACAACTAACACAGGCTTCATGAGCTCGCCAACATATAGCTGCTCATCCATCTGA 4242 43.31 MLQQRLFGYFNVVFYLTILTSLARAFTNPSDVAALQDLYSAMNYPLELKGWRKEGGDPCEESWTGVSCSGFSVMYLKLHGLNLTGNLGGRLNNLINLKQMDVSSNRLTGEIPHNLPPNATHINMAFNRLSKNLPHTLSYMGNLRHINLSHNTLSGVLGNVFAGLQNLREMDLSYNDFAGDLPNSFSSLTNITRLIGSNRLRPQVNSPPWDFPLGKDPIVQNISGPPTTKSNAIQNYPSRGAVRHEKRRHGSGGIGLLVGGVTLVVTFAALFVVFSMKKVHEKKINLKITNTLPRSLSLGKTEDGSSTAPEEGSQSLPLSSQFMSCPRPIPILNHTRTEKFSGRKGFSNRCRLPVRTKIYTLAEVQSTTNNFSQENLLGEGSLGAVYRAEFPDGQVLAVKNLNMGALSFTEEEQFLDVVWTASRLGHPNIVTLLGYCVEHGQHILGYEYVRNLSLDDALHCEAYMPLSWTVRLQIALGVARALDLKAANILLDEELMPRICDCGLSVLRPFVTNGVKTKASEIVSGDIGYLAPEHGQPGFDNTRSDVYTFGVLLLELVTGRKPFDNSKPREEQSLVKWASSRLHDNESLEQMVDPSIKGTFSSKSLSRFVDIISLCIQPAKEFRPPMSEIVEHLTNLQRKMEMAKRAAIEGTEVDLFEKSFRSTNTGYSQFTLRSALLSLDLLTFFTARKSTRSSSTDPKFLHSSLHFRSALLIRFADWLVYDWHSEFDCLSFGILNSECLFCSVLAIEEKTSKLVVISQEMAHLRAVMYFSVIVFLATLTSVVQCFTDPQDVLALLNLYSTLNYPPELKGWRTNGGDPCGGTWTGVFCVGSSVIDLKLNRLNLSGNLGDQLYLLHNLKRLDVSCNKILGEIPSGLPPNVTYMNLSHNVLSGPIANVFSGLQNLVEMDLSYNNFTGDLSNSFAALTNINRLIGGNGFDVSKSPPCDFSLEKAPLTYNNSRPPLTESITIEKCPYKKKVGKKGGKLGPGGIAIVAGGGGFVIILAALFIAICKTQICAKKGSVKHVNMSLPISTAAVIPPDDSPNILPLGSPVIGGGPNCACSTRHARTERAYGRRSFSRRSRFPVKTKTYTVTELESATKKYSEENLLGEGSLGSVYKAEFPDGQILAVKMVDMAALSFTEEQQFLDVVCTITRLRHPNIVSLLGYSVENGQHLLAYEYVGNLSLDDALHSVGQNPLSWSVRLQIAHGVAKALDYLHNAFFPPLAHFNLKAANIMLDEELMPKICDCGLSVLKPLAAQIAIADTGYFAPEYGQSGIDYTKNDVYAFGVLLLELITGKKPNDLRPGIEQSRLRRASFQLHDCGSLDEIIDPDIKGTISSKVLSRYADIITLCIQPVTKRRPPMFAIVGYLTSIRRRVEIEKRAAVVSKAIDTFEKSFHTTNTGFMSSPTYSCSSI 1413
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 1982682 1994200 + Carg03558-RA Car14g00396 160298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car14g00396 1413 Coils Coil 626 646 - -
Car14g00396 1413 ProSiteProfiles Protein kinase domain profile. 1101 1371 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car14g00396 1413 Pfam Leucine rich repeat 856 913 IPR001611 GO:0005515
Car14g00396 1413 Pfam Leucine rich repeat 118 177 IPR001611 GO:0005515
Car14g00396 1413 Pfam Protein kinase domain 1101 1362 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car14g00396 1413 Pfam Leucine rich repeat N-terminal domain 29 69 IPR013210 -
Car14g00396 1413 Pfam Leucine rich repeat N-terminal domain 789 828 IPR013210 -
Car14g00396 1413 Pfam Protein tyrosine and serine/threonine kinase 374 633 IPR001245 GO:0004672|GO:0006468
Car14g00396 1413 MobiDBLite consensus disorder prediction 295 320 - -
Car14g00396 1413 ProSiteProfiles Protein kinase domain profile. 371 635 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car06g00077 Car14g00396 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car14g00396 Car-Chr14:1982682 Car17g00608 Car-Chr17:5738112 2.25E-09 dispersed
Car14g00396 Car-Chr14:1982682 Car06g00077 Car-Chr6:478346 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
89318 PF00069 Pkinase 2.20E-31 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car14g00396 - - cpep:111791529 1164.83