Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car14g00399 AATCTCCCTTCCATTTCTTCAAATTTCATAACCAAAGATGGAGGAGGTGATGATTTGGGAGAATTGGATCAAGCCCTTTTTCTGTATCTGGATGGACAAGAACCCTCTTCAACCACTACTACTCATCACCAATCACAGAGCTCGAGCATGAGACCGCCGATGTTGAACATCTTCCCGTCGCAGCCGATGCATGTCGACCCGTTGCCGATAAAAGGAAGCACAGCAATGATTAACCATGGTGATTCAAAGATCAAACCATCAGAGCCGTCCAAAGAGTTGGCCAACAAACGCAGCCATGGAGCCACCGTATCCGGACCAACCCTAACCCAAACCACGACAACCGAACCTCATCCCAAACCTCCAAAACGTGAAGCCAACAAGAAAGGGCTGACCTCAAGCTCAGACCAAGAAGCCCCCAAAACTCCAGACCCCAAGGCGTATGTTCAGCAGCTAGAATTGAGTAGGATTAAGCTCACGCAGCTGGAACAAGAGCTACAAAGAGCAAGAACTCAGGGTATGTTTCTCGGCGGTGGTGGTGGCGGCGCCGCCGTTTTAGGACCTGACCAAGGACTTCCCGTCGGCCTCCATAACCTCACCACCGAAGCGGCGGTGTTCGACATCGAATACGGGCGGTGGCAAGAGGAGCACCACCGATTGATGTGCGAGCTCCGAGCAGCGGTGCAAGAACATTTACGGGAAAACGAACTGCGGTTGTTCGTCGATAGTTGTCTGGCTCATTACGACGAGATTCTAAACTTGAAGATGATGGTTGCTAGGTCCGACGTCTTCCACCTTGTCTCCGGCATGTGGAAGACGCCGGCGGAGAGATGCTTCATGTGGATCGGCGACTTCAGGCCCTCCGAGCTTATTAAGATAATAATGGGACAAGTAGAGCCATTAACAGAGCATCAACTAATGAACATTTGTGGACTGCAACAATCAACGCAAGAGAGTGAGGAAGCATTGTCTCAAGGGCTTGAAGCCCTAAACCAGTCCTTATCAGACACCATCACCTCTGATTCATTGAGTACCCCTCCCAATATGGCTAACTATATGGGGCAGATGACCTTAGCCATCAACAAGCTCTCCTCTCTTGAAGCTTTTGTAAGACAGGCGGATAATTTGAGGCACCAAACGCTTCACCGGTTGCATCAAATGTTGACGACTCGTCAAGCCGCAAGGTGTTTGCTAGCCATTGCAGAGTATTTCCATCGTCTTCGAGCTCTTAGTTCCTTGTGGTTGGCTCGTCCAAGGCAAGATTAA 1263 50.04 NLPSISSNFITKDGGGDDLGELDQALFLYLDGQEPSSTTTTHHQSQSSSMRPPMLNIFPSQPMHVDPLPIKGSTAMINHGDSKIKPSEPSKELANKRSHGATVSGPTLTQTTTTEPHPKPPKREANKKGLTSSSDQEAPKTPDPKAYVQQLELSRIKLTQLEQELQRARTQGMFLGGGGGGAAVLGPDQGLPVGLHNLTTEAAVFDIEYGRWQEEHHRLMCELRAAVQEHLRENELRLFVDSCLAHYDEILNLKMMVARSDVFHLVSGMWKTPAERCFMWIGDFRPSELIKIIMGQVEPLTEHQLMNICGLQQSTQESEEALSQGLEALNQSLSDTITSDSLSTPPNMANYMGQMTLAINKLSSLEAFVRQADNLRHQTLHRLHQMLTTRQAARCLLAIAEYFHRLRALSSLWLARPRQD 420
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 2012271 2016113 + Carg03555-RA Car14g00399 160301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car14g00399 420 MobiDBLite consensus disorder prediction 34 55 - -
Car14g00399 420 ProSiteProfiles DOG1 domain profile. 202 416 IPR025422 GO:0006351|GO:0043565
Car14g00399 420 MobiDBLite consensus disorder prediction 34 144 - -
Car14g00399 420 Pfam Seed dormancy control 220 294 IPR025422 GO:0006351|GO:0043565
Car14g00399 420 Coils Coil 148 171 - -
Car14g00399 420 MobiDBLite consensus disorder prediction 100 116 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car06g00074 Car14g00399 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car14g00399 Car-Chr14:2012271 Car14g00465 Car-Chr14:2438490 1.35E-113 dispersed
Car14g00399 Car-Chr14:2012271 Car06g00074 Car-Chr6:464387 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car14g00399 K14431 - csv:101204923 682.945