Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car14g00403 ATGGAGATTAGAGTGGGGACTGTTGGTGGATCCAGTCCAATCGGGCGTCAATCGGATGATTCTGGACTTGAGTCGCTTCAATTCTGCGAAGAAATTCAGGGGTTGATGACGATTCCGGCGGAAAATGCTAGCTCCTTTACGGCACTTCTGGAGCTTCCGGCGACGCAGGCTTTAGAGCTTCTCCACTCACCGGATTCCGCCGGTGGTGCGACGGCGGCGGTTGTGACGGATGATTCCGTTCCGAAACCCTACTTCAGTGCCTTCAATTGCAATTTGACGTTCCCGATGAACTCGGCTTTAATTGAACGCGCTGCCAAATTCTCTGTCTTAGCCGAAGAGCATTCGCCGGATACGACAAGTAAAGTGGCGTTGAATTTGGAGAAGGTGAAGAACGAGCCCACCACTGAAACCGATTCGAACCCTAATCCGTTGCAGATATTAATCTCCGATCCGGCGGTGGAGAACACGAACCAGAGATCGACGAAGAGGAAGGAGCGCGAGAAAAAGGGAAAAGGGTCAACGAAGAAGAGCAAGAACGAAAGCAGCGAGGCGGCTGAAAAGCTTCCTTACATCCATGTCCGAGCTCGCCGTGGTCAAGCGACGGACAGCCATAGCCTAGCAGAGCGAGCGAGGAGAGAGAAAATCAATGCTCGGATGAAGCTTCTTCAAGAACTGGTCCCTGGATGCAATAAGATCTCAGGTACAGCCTTAGTGTTGGATGAAATCATCAACCATGTTCAATCACTGCAGCGTCAAGTGGAGTTCTTGTCAATGAGGCTTGCAGCAGTTAACCCCAGAGTTGATTTCAACATTGATAGCATATTGGCTGCAGAAAACGAAGCGATACTGGAAAGCAACTTTCCGAGCATGGTTGCGCCGTTGATGTGGCCAGAAATCCCAGTAAATGGAACCAGACAACAATATCAACAACAATGGCATTTCGACGGTGCAGTTAACCAGCGAGCGTGGACGATGGATGAACATAATCATCATAATTTCAGCACCCCCGAAAACTCTCTTTTAAGTTACGACTCTTCAGCGAATTCAGGTAAAGAGGTCTTAGAAAATAGCAATACTGGAAATATGAGAACTGAATTGAAACTAAGTTGA 1110 48.56 MEIRVGTVGGSSPIGRQSDDSGLESLQFCEEIQGLMTIPAENASSFTALLELPATQALELLHSPDSAGGATAAVVTDDSVPKPYFSAFNCNLTFPMNSALIERAAKFSVLAEEHSPDTTSKVALNLEKVKNEPTTETDSNPNPLQILISDPAVENTNQRSTKRKEREKKGKGSTKKSKNESSEAAEKLPYIHVRARRGQATDSHSLAERARREKINARMKLLQELVPGCNKISGTALVLDEIINHVQSLQRQVEFLSMRLAAVNPRVDFNIDSILAAENEAILESNFPSMVAPLMWPEIPVNGTRQQYQQQWHFDGAVNQRAWTMDEHNHHNFSTPENSLLSYDSSANSGKEVLENSNTGNMRTELKLS 369
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 2032496 2036580 + Carg03551-RA Car14g00403 160305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car14g00403 369 MobiDBLite consensus disorder prediction 334 369 - -
Car14g00403 369 MobiDBLite consensus disorder prediction 131 188 - -
Car14g00403 369 MobiDBLite consensus disorder prediction 172 188 - -
Car14g00403 369 MobiDBLite consensus disorder prediction 1 20 - -
Car14g00403 369 Coils Coil 239 259 - -
Car14g00403 369 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 199 249 IPR011598 GO:0046983
Car14g00403 369 MobiDBLite consensus disorder prediction 135 156 - -
Car14g00403 369 Pfam Helix-loop-helix DNA-binding domain 203 250 IPR011598 GO:0046983
Car14g00403 369 MobiDBLite consensus disorder prediction 329 369 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car06g00071 Car14g00403 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car14g00403 Car-Chr14:2032496 Car11g00923 Car-Chr11:5855366 2.88E-44 dispersed
Car14g00403 Car-Chr14:2032496 Car06g00071 Car-Chr6:450901 3.53E-76 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
4628 PF00010 HLH 1.40E-05 No_clan Car TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car14g00403 - - csv:101205014 573.163