Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Car14g00403 | ATGGAGATTAGAGTGGGGACTGTTGGTGGATCCAGTCCAATCGGGCGTCAATCGGATGATTCTGGACTTGAGTCGCTTCAATTCTGCGAAGAAATTCAGGGGTTGATGACGATTCCGGCGGAAAATGCTAGCTCCTTTACGGCACTTCTGGAGCTTCCGGCGACGCAGGCTTTAGAGCTTCTCCACTCACCGGATTCCGCCGGTGGTGCGACGGCGGCGGTTGTGACGGATGATTCCGTTCCGAAACCCTACTTCAGTGCCTTCAATTGCAATTTGACGTTCCCGATGAACTCGGCTTTAATTGAACGCGCTGCCAAATTCTCTGTCTTAGCCGAAGAGCATTCGCCGGATACGACAAGTAAAGTGGCGTTGAATTTGGAGAAGGTGAAGAACGAGCCCACCACTGAAACCGATTCGAACCCTAATCCGTTGCAGATATTAATCTCCGATCCGGCGGTGGAGAACACGAACCAGAGATCGACGAAGAGGAAGGAGCGCGAGAAAAAGGGAAAAGGGTCAACGAAGAAGAGCAAGAACGAAAGCAGCGAGGCGGCTGAAAAGCTTCCTTACATCCATGTCCGAGCTCGCCGTGGTCAAGCGACGGACAGCCATAGCCTAGCAGAGCGAGCGAGGAGAGAGAAAATCAATGCTCGGATGAAGCTTCTTCAAGAACTGGTCCCTGGATGCAATAAGATCTCAGGTACAGCCTTAGTGTTGGATGAAATCATCAACCATGTTCAATCACTGCAGCGTCAAGTGGAGTTCTTGTCAATGAGGCTTGCAGCAGTTAACCCCAGAGTTGATTTCAACATTGATAGCATATTGGCTGCAGAAAACGAAGCGATACTGGAAAGCAACTTTCCGAGCATGGTTGCGCCGTTGATGTGGCCAGAAATCCCAGTAAATGGAACCAGACAACAATATCAACAACAATGGCATTTCGACGGTGCAGTTAACCAGCGAGCGTGGACGATGGATGAACATAATCATCATAATTTCAGCACCCCCGAAAACTCTCTTTTAAGTTACGACTCTTCAGCGAATTCAGGTAAAGAGGTCTTAGAAAATAGCAATACTGGAAATATGAGAACTGAATTGAAACTAAGTTGA | 1110 | 48.56 | MEIRVGTVGGSSPIGRQSDDSGLESLQFCEEIQGLMTIPAENASSFTALLELPATQALELLHSPDSAGGATAAVVTDDSVPKPYFSAFNCNLTFPMNSALIERAAKFSVLAEEHSPDTTSKVALNLEKVKNEPTTETDSNPNPLQILISDPAVENTNQRSTKRKEREKKGKGSTKKSKNESSEAAEKLPYIHVRARRGQATDSHSLAERARREKINARMKLLQELVPGCNKISGTALVLDEIINHVQSLQRQVEFLSMRLAAVNPRVDFNIDSILAAENEAILESNFPSMVAPLMWPEIPVNGTRQQYQQQWHFDGAVNQRAWTMDEHNHHNFSTPENSLLSYDSSANSGKEVLENSNTGNMRTELKLS | 369 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
14 | 2032496 | 2036580 | + | Carg03551-RA | Car14g00403 | 160305 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Car14g00403 | 369 | MobiDBLite | consensus disorder prediction | 334 | 369 | - | - | |
Car14g00403 | 369 | MobiDBLite | consensus disorder prediction | 131 | 188 | - | - | |
Car14g00403 | 369 | MobiDBLite | consensus disorder prediction | 172 | 188 | - | - | |
Car14g00403 | 369 | MobiDBLite | consensus disorder prediction | 1 | 20 | - | - | |
Car14g00403 | 369 | Coils | Coil | 239 | 259 | - | - | |
Car14g00403 | 369 | ProSiteProfiles | Myc-type, basic helix-loop-helix (bHLH) domain profile. | 199 | 249 | IPR011598 | GO:0046983 | |
Car14g00403 | 369 | MobiDBLite | consensus disorder prediction | 135 | 156 | - | - | |
Car14g00403 | 369 | Pfam | Helix-loop-helix DNA-binding domain | 203 | 250 | IPR011598 | GO:0046983 | |
Car14g00403 | 369 | MobiDBLite | consensus disorder prediction | 329 | 369 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Car06g00071 | Car14g00403 | CST |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Car14g00403 | Car-Chr14:2032496 | Car11g00923 | Car-Chr11:5855366 | 2.88E-44 | dispersed | |
Car14g00403 | Car-Chr14:2032496 | Car06g00071 | Car-Chr6:450901 | 3.53E-76 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
4628 | PF00010 | HLH | 1.40E-05 | No_clan | Car | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Car14g00403 | - | - | csv:101205014 | 573.163 |