Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car14g00415 ATGAATAACTTGACTGTTGAAACGGAAGATGCCTTTTCGAGCTTGCTCGAGCTTGCTGCGAATGATGATGTTGATGCCTTCAAGAGATCGATTGAGCGTGATCTTTCTGGCATTGATGAGATTGGTTTCTGGTATGGTCGATTACGAGGCTCGAAGCAGATGACTAATGAGCAGAGAACTCCTTTAATGGTTGCTGCTACGTATGGTAGCATTGAGGTTCTGAAGCTTATTCTTTCTCTTTCTTGTGCTGATGTGAACCGCGCTGTTGGACTTGATAGAAGCACTGCCCTTCACTGTGCAGCCTCCGGTGGGGCTGCAAATGCTGTAGATGTAGTGAAGCTGCTCTTAGCTGCTGGTGCTGATCCTAATATGGTCGATGGGAATGGACATCGACCGGTTGATGTGGTTGTTGCCCCGCTAAGGCACGCTGAGCTTAAATCAACCCTTACCGAACTTCTTAAGACAAATGGTTTCTCTGGTGATGGAAATCTTGATGCTTTAACAGGTGCTAGAAATTCTCTTTCTCCTCGCCCTTCGTCTCCTCTGAATGCTCCATCGTTCACATCGGAGTTAGTTTCATCTCCAACAAAGTCGAAACTAAGTGATTTTTCAATGTATCCTGCATCTGAGAAGAAAGAATACCCTGTTGATCTTTCTCTTCCAGATATCAAGAACAGTATCTACTCAACTGATGAATTCCGAATGTATTCATTCAAGGTTCGACCCTGCTCACGTGCCTACTCTCATGATTGGACTGAGTGTCCCTTTGTCCACCCTGGAGAAAATGCTAGGAGGAGGGATCCTAGAAAGTTCCATTATAGCTGTGTAACCTGTCCTGATTTTCGGAAGGGCGCTTGCAGACGGGGAGATATGTGCGAATATGCTCATGGGGTGTTTGAGTGTTGGCTGCACCCAGCACAATATCGAACCCGCCTTTGCAAAGATGGCACGAATTGCTCAAGGAGAGTTTGCTTCTTTGCACACACCACTGAGGAACTGCGACCTCTGTATGTTTCGACTGGCTCTGCTGTTCCCTCACCACGTTCTTGTACTTCTGGGGCTTCTGCTATGGATTATACTACAGTCATGAACCTTCTACCTGGTTCTCCATCTTCGGTCCCTGTGATGTCTCCATCACCGTTCACTCCTCCGATGTCTCCATCTGCCAATGGCATGTCGCATCCGTCCGTGGCTTGGCCCCAACCAAATGTACCTGCCTTGCTTCTTCCAGGAAGCAATATTCAATCCAGCCGCCTAAGATCTTCCTTGAGTGCAAGAGATATTCCTGTCGAGGACTTCGATTATCTGAGTGATTTCGAACTGCAGCAGCAGCAGCAGCAGCAGCTCGTTAATGACTTGAATTGTCTTTCTCAACCACCATTAAGTTCAAATTCGCTGAGCCGTTCTGGTCGACTGAAAACTATGACCCCTTCAAATCTTGACGATCTCTTCTCTGCTGAGAGTTCATCTCCCAGATACTCTGATCAAGCTCTGGCTTCAGCTGTTTTCTCCCCTACACACAAATCAGCAGTTATCAATCAATTTCAGCAGCAACAGAATATGTTGTCACCAATCAATACAAATTTCTCTCCTAAAAATGTTGATCATCCTCTATTGCAAGCCTCTTTTGGGGTTCCATCATCTGGGAGGATGTCTCCACGAAATCTGGAACCCCCCATCTCTCCAGTGGGCTCACGCTTGTCCATGTTAGCTCAAAGAGAGAAACAGCAACAGTTTCGCAGTCTCAGCTCCCGTGAACTCGGTGCCAATTCTGCTTCTATTGTTGGTTCCCCTGCAAGCTCTTGGTCTAAATGGGGACCTTCTAATGGAAGGCCTGACTGGGCAGTCAATGCGGATGAAATGGGTAAACTTCGACGTTCATCATCATTTGAGCTCGGGAACAACGGCGAAGAGCCAGATTTATCATGGGTTCAATCACTAGTGAAAGAATCTCCAACTGAGATAAAAGAAAAGCAGGCTCATCCAAATTTGGGTGGCGGCGATAGTTTCGTATCTTCTGGTGAGAGTTCTAACGTGAACTCGCAAATGGAGTCAGTCGATCATGCTGCATTAGGAGCATGGCTGGAACAAATGCAGCTCGATCATCTCGTCGCGCTACAGAACTAA 2127 46.83 MNNLTVETEDAFSSLLELAANDDVDAFKRSIERDLSGIDEIGFWYGRLRGSKQMTNEQRTPLMVAATYGSIEVLKLILSLSCADVNRAVGLDRSTALHCAASGGAANAVDVVKLLLAAGADPNMVDGNGHRPVDVVVAPLRHAELKSTLTELLKTNGFSGDGNLDALTGARNSLSPRPSSPLNAPSFTSELVSSPTKSKLSDFSMYPASEKKEYPVDLSLPDIKNSIYSTDEFRMYSFKVRPCSRAYSHDWTECPFVHPGENARRRDPRKFHYSCVTCPDFRKGACRRGDMCEYAHGVFECWLHPAQYRTRLCKDGTNCSRRVCFFAHTTEELRPLYVSTGSAVPSPRSCTSGASAMDYTTVMNLLPGSPSSVPVMSPSPFTPPMSPSANGMSHPSVAWPQPNVPALLLPGSNIQSSRLRSSLSARDIPVEDFDYLSDFELQQQQQQQLVNDLNCLSQPPLSSNSLSRSGRLKTMTPSNLDDLFSAESSSPRYSDQALASAVFSPTHKSAVINQFQQQQNMLSPINTNFSPKNVDHPLLQASFGVPSSGRMSPRNLEPPISPVGSRLSMLAQREKQQQFRSLSSRELGANSASIVGSPASSWSKWGPSNGRPDWAVNADEMGKLRRSSSFELGNNGEEPDLSWVQSLVKESPTEIKEKQAHPNLGGGDSFVSSGESSNVNSQMESVDHAALGAWLEQMQLDHLVALQN 708
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 2109824 2111950 - Carg03539-RA Car14g00415 160317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car14g00415 708 MobiDBLite consensus disorder prediction 574 608 - -
Car14g00415 708 ProSiteProfiles Ankyrin repeat profile. 92 127 IPR002110 GO:0005515
Car14g00415 708 Pfam Ankyrin repeats (3 copies) 55 126 IPR002110 GO:0005515
Car14g00415 708 MobiDBLite consensus disorder prediction 669 684 - -
Car14g00415 708 MobiDBLite consensus disorder prediction 455 474 - -
Car14g00415 708 MobiDBLite consensus disorder prediction 171 193 - -
Car14g00415 708 ProSiteProfiles Zinc finger C3H1-type profile. 277 299 IPR000571 GO:0046872
Car14g00415 708 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 277 297 IPR000571 GO:0046872
Car14g00415 708 ProSiteProfiles Ankyrin repeat region circular profile. 92 126 - -
Car14g00415 708 MobiDBLite consensus disorder prediction 574 607 - -
Car14g00415 708 MobiDBLite consensus disorder prediction 652 684 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car06g00061 Car14g00415 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car01g00205 Car-Chr1:1119721 Car14g00415 Car-Chr14:2109824 0 dispersed
Car02g00534 Car-Chr2:4159493 Car14g00415 Car-Chr14:2109824 1.74E-160 dispersed
Car04g00144 Car-Chr4:787657 Car14g00415 Car-Chr14:2109824 1.09E-159 dispersed
Car04g01038 Car-Chr4:5949558 Car14g00415 Car-Chr14:2109824 3.89E-163 dispersed
Car14g00415 Car-Chr14:2109824 Car14g00909 Car-Chr14:5436453 0 dispersed
Car19g00787 Car-Chr19:8548602 Car14g00415 Car-Chr14:2109824 2.38E-59 dispersed
Car14g00415 Car-Chr14:2109824 Car06g00061 Car-Chr6:399944 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
4632 PF12796 Ank_2 7.50E-10 CL0465 Car TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car14g00415 - - csv:101207646 1248.42