Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Car14g00415 | ATGAATAACTTGACTGTTGAAACGGAAGATGCCTTTTCGAGCTTGCTCGAGCTTGCTGCGAATGATGATGTTGATGCCTTCAAGAGATCGATTGAGCGTGATCTTTCTGGCATTGATGAGATTGGTTTCTGGTATGGTCGATTACGAGGCTCGAAGCAGATGACTAATGAGCAGAGAACTCCTTTAATGGTTGCTGCTACGTATGGTAGCATTGAGGTTCTGAAGCTTATTCTTTCTCTTTCTTGTGCTGATGTGAACCGCGCTGTTGGACTTGATAGAAGCACTGCCCTTCACTGTGCAGCCTCCGGTGGGGCTGCAAATGCTGTAGATGTAGTGAAGCTGCTCTTAGCTGCTGGTGCTGATCCTAATATGGTCGATGGGAATGGACATCGACCGGTTGATGTGGTTGTTGCCCCGCTAAGGCACGCTGAGCTTAAATCAACCCTTACCGAACTTCTTAAGACAAATGGTTTCTCTGGTGATGGAAATCTTGATGCTTTAACAGGTGCTAGAAATTCTCTTTCTCCTCGCCCTTCGTCTCCTCTGAATGCTCCATCGTTCACATCGGAGTTAGTTTCATCTCCAACAAAGTCGAAACTAAGTGATTTTTCAATGTATCCTGCATCTGAGAAGAAAGAATACCCTGTTGATCTTTCTCTTCCAGATATCAAGAACAGTATCTACTCAACTGATGAATTCCGAATGTATTCATTCAAGGTTCGACCCTGCTCACGTGCCTACTCTCATGATTGGACTGAGTGTCCCTTTGTCCACCCTGGAGAAAATGCTAGGAGGAGGGATCCTAGAAAGTTCCATTATAGCTGTGTAACCTGTCCTGATTTTCGGAAGGGCGCTTGCAGACGGGGAGATATGTGCGAATATGCTCATGGGGTGTTTGAGTGTTGGCTGCACCCAGCACAATATCGAACCCGCCTTTGCAAAGATGGCACGAATTGCTCAAGGAGAGTTTGCTTCTTTGCACACACCACTGAGGAACTGCGACCTCTGTATGTTTCGACTGGCTCTGCTGTTCCCTCACCACGTTCTTGTACTTCTGGGGCTTCTGCTATGGATTATACTACAGTCATGAACCTTCTACCTGGTTCTCCATCTTCGGTCCCTGTGATGTCTCCATCACCGTTCACTCCTCCGATGTCTCCATCTGCCAATGGCATGTCGCATCCGTCCGTGGCTTGGCCCCAACCAAATGTACCTGCCTTGCTTCTTCCAGGAAGCAATATTCAATCCAGCCGCCTAAGATCTTCCTTGAGTGCAAGAGATATTCCTGTCGAGGACTTCGATTATCTGAGTGATTTCGAACTGCAGCAGCAGCAGCAGCAGCAGCTCGTTAATGACTTGAATTGTCTTTCTCAACCACCATTAAGTTCAAATTCGCTGAGCCGTTCTGGTCGACTGAAAACTATGACCCCTTCAAATCTTGACGATCTCTTCTCTGCTGAGAGTTCATCTCCCAGATACTCTGATCAAGCTCTGGCTTCAGCTGTTTTCTCCCCTACACACAAATCAGCAGTTATCAATCAATTTCAGCAGCAACAGAATATGTTGTCACCAATCAATACAAATTTCTCTCCTAAAAATGTTGATCATCCTCTATTGCAAGCCTCTTTTGGGGTTCCATCATCTGGGAGGATGTCTCCACGAAATCTGGAACCCCCCATCTCTCCAGTGGGCTCACGCTTGTCCATGTTAGCTCAAAGAGAGAAACAGCAACAGTTTCGCAGTCTCAGCTCCCGTGAACTCGGTGCCAATTCTGCTTCTATTGTTGGTTCCCCTGCAAGCTCTTGGTCTAAATGGGGACCTTCTAATGGAAGGCCTGACTGGGCAGTCAATGCGGATGAAATGGGTAAACTTCGACGTTCATCATCATTTGAGCTCGGGAACAACGGCGAAGAGCCAGATTTATCATGGGTTCAATCACTAGTGAAAGAATCTCCAACTGAGATAAAAGAAAAGCAGGCTCATCCAAATTTGGGTGGCGGCGATAGTTTCGTATCTTCTGGTGAGAGTTCTAACGTGAACTCGCAAATGGAGTCAGTCGATCATGCTGCATTAGGAGCATGGCTGGAACAAATGCAGCTCGATCATCTCGTCGCGCTACAGAACTAA | 2127 | 46.83 | MNNLTVETEDAFSSLLELAANDDVDAFKRSIERDLSGIDEIGFWYGRLRGSKQMTNEQRTPLMVAATYGSIEVLKLILSLSCADVNRAVGLDRSTALHCAASGGAANAVDVVKLLLAAGADPNMVDGNGHRPVDVVVAPLRHAELKSTLTELLKTNGFSGDGNLDALTGARNSLSPRPSSPLNAPSFTSELVSSPTKSKLSDFSMYPASEKKEYPVDLSLPDIKNSIYSTDEFRMYSFKVRPCSRAYSHDWTECPFVHPGENARRRDPRKFHYSCVTCPDFRKGACRRGDMCEYAHGVFECWLHPAQYRTRLCKDGTNCSRRVCFFAHTTEELRPLYVSTGSAVPSPRSCTSGASAMDYTTVMNLLPGSPSSVPVMSPSPFTPPMSPSANGMSHPSVAWPQPNVPALLLPGSNIQSSRLRSSLSARDIPVEDFDYLSDFELQQQQQQQLVNDLNCLSQPPLSSNSLSRSGRLKTMTPSNLDDLFSAESSSPRYSDQALASAVFSPTHKSAVINQFQQQQNMLSPINTNFSPKNVDHPLLQASFGVPSSGRMSPRNLEPPISPVGSRLSMLAQREKQQQFRSLSSRELGANSASIVGSPASSWSKWGPSNGRPDWAVNADEMGKLRRSSSFELGNNGEEPDLSWVQSLVKESPTEIKEKQAHPNLGGGDSFVSSGESSNVNSQMESVDHAALGAWLEQMQLDHLVALQN | 708 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
14 | 2109824 | 2111950 | - | Carg03539-RA | Car14g00415 | 160317 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Car14g00415 | 708 | MobiDBLite | consensus disorder prediction | 574 | 608 | - | - | |
Car14g00415 | 708 | ProSiteProfiles | Ankyrin repeat profile. | 92 | 127 | IPR002110 | GO:0005515 | |
Car14g00415 | 708 | Pfam | Ankyrin repeats (3 copies) | 55 | 126 | IPR002110 | GO:0005515 | |
Car14g00415 | 708 | MobiDBLite | consensus disorder prediction | 669 | 684 | - | - | |
Car14g00415 | 708 | MobiDBLite | consensus disorder prediction | 455 | 474 | - | - | |
Car14g00415 | 708 | MobiDBLite | consensus disorder prediction | 171 | 193 | - | - | |
Car14g00415 | 708 | ProSiteProfiles | Zinc finger C3H1-type profile. | 277 | 299 | IPR000571 | GO:0046872 | |
Car14g00415 | 708 | Pfam | Zinc finger C-x8-C-x5-C-x3-H type (and similar) | 277 | 297 | IPR000571 | GO:0046872 | |
Car14g00415 | 708 | ProSiteProfiles | Ankyrin repeat region circular profile. | 92 | 126 | - | - | |
Car14g00415 | 708 | MobiDBLite | consensus disorder prediction | 574 | 607 | - | - | |
Car14g00415 | 708 | MobiDBLite | consensus disorder prediction | 652 | 684 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Car06g00061 | Car14g00415 | CST |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Car01g00205 | Car-Chr1:1119721 | Car14g00415 | Car-Chr14:2109824 | 0 | dispersed | |
Car02g00534 | Car-Chr2:4159493 | Car14g00415 | Car-Chr14:2109824 | 1.74E-160 | dispersed | |
Car04g00144 | Car-Chr4:787657 | Car14g00415 | Car-Chr14:2109824 | 1.09E-159 | dispersed | |
Car04g01038 | Car-Chr4:5949558 | Car14g00415 | Car-Chr14:2109824 | 3.89E-163 | dispersed | |
Car14g00415 | Car-Chr14:2109824 | Car14g00909 | Car-Chr14:5436453 | 0 | dispersed | |
Car19g00787 | Car-Chr19:8548602 | Car14g00415 | Car-Chr14:2109824 | 2.38E-59 | dispersed | |
Car14g00415 | Car-Chr14:2109824 | Car06g00061 | Car-Chr6:399944 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
4632 | PF12796 | Ank_2 | 7.50E-10 | CL0465 | Car | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Car14g00415 | - | - | csv:101207646 | 1248.42 |