Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Car14g00419 | ATGGAAAATCACGGCGATGATCCAAATAGCTCCGAGAGGGCGGAGCCGGTGAGGTCACGGTGGACGCCGAAGCCGGAGCAGATTCTGATTCTTGAATCTATTTTCAATAGTGGAATGGTGAATCCACCAAAAGATGAGACGGTCAGAATTAGAAAGCTGCTTGAGAAATTTGGCTCTGTTGGCGACGCCAATGTTTTCTACTGGTTTCAGAATCGCCGCTCCCGGTCTCGCCGCCGCCAGCGTCAGCTTCAGGCTGCCGCTACTCATCAAGCTACCGGCGGTGGCGGTGGTGGTGGTGGTGGTGGTGGTGGCGGTAACGGCGGTCGCTACAATAGTGGTGTTATGAATTTTGCTGGTTCCTCCTCTTACTTCGGAGGTGGGTCGTCGTCGTCGTCGTCCTCTGCTTCTGGTGGCGGTGGCGGCGGTGGTAGTAGTGAAAGTGGGTGTTTTTCCATGGTGGGTCATATGGGTTTGTCGGAAATTGATCAGCAGATGGGTGTGGCGCCGTCTTTTTGCCCGCCGGAAACCTTAAACTTGGAGTTTCAATCAGGATATAATATTATAATATTCATAAATGGAGTTCCAACAGAAGTGCCAAAAGGGCCAGTGGACATGAAGGCAATGTTTGGGCAAGAGACAGTGTTGGTTCATTCATCAGGACTCCCAGTTCTTACCAATGAATTTGGAATCTCTCTGCACTCTTTGCAGCATGGTGAAAGCTATTTTCTGGTAATTACTCCTCAATTTCATCGTTTCGTTCGATAA | 765 | 49.93 | MENHGDDPNSSERAEPVRSRWTPKPEQILILESIFNSGMVNPPKDETVRIRKLLEKFGSVGDANVFYWFQNRRSRSRRRQRQLQAAATHQATGGGGGGGGGGGGGNGGRYNSGVMNFAGSSSYFGGGSSSSSSSASGGGGGGGSSESGCFSMVGHMGLSEIDQQMGVAPSFCPPETLNLEFQSGYNIIIFINGVPTEVPKGPVDMKAMFGQETVLVHSSGLPVLTNEFGISLHSLQHGESYFLVITPQFHRFVR | 254 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 14 | 2139594 | 2140704 | + | Carg03535-RA | Car14g00419 | 160321 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Car14g00419 | 254 | MobiDBLite | consensus disorder prediction | 77 | 106 | - | - | |
| Car14g00419 | 254 | Pfam | Homeodomain | 18 | 78 | IPR001356 | GO:0003677 | |
| Car14g00419 | 254 | ProSiteProfiles | 'Homeobox' domain profile. | 14 | 79 | IPR001356 | GO:0003677 | |
| Car14g00419 | 254 | MobiDBLite | consensus disorder prediction | 1 | 20 | - | - | |
| Car14g00419 | 254 | MobiDBLite | consensus disorder prediction | 1 | 21 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Car03g01165 | Car-Chr3:9289111 | Car14g00419 | Car-Chr14:2139594 | 3.90E-15 | dispersed | |
| Car07g00176 | Car-Chr7:1016031 | Car14g00419 | Car-Chr14:2139594 | 1.14E-15 | dispersed | |
| Car14g00419 | Car-Chr14:2139594 | Car13g00827 | Car-Chr13:8977287 | 4.15E-16 | dispersed | |
| Car14g00419 | Car-Chr14:2139594 | Car06g00058 | Car-Chr6:380691 | 8.16E-107 | wgd |
Transcription factors information
| Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
|---|---|---|---|---|---|---|---|
| 4633 | PF00046 | Homeodomain | 6.50E-13 | CL0123 | Car | TF |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Car14g00419 | - | - | csv:101207317 | 317.775 |