Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Car14g00453 | ATGAGGGAAGAGGATTCAAATTGGTTCTCAAAATGGGAAGAGGAGCTTCCTTCTCCTGAGGAATTGATGCCTCTTTCCCAAACCCTTATCACCCCTGATCTTGCTGTGGCATTTGACATATCGAGCTCAAATGCTGCCATTGATAACAACAGCCATCCGCCACCGCCGCCGCCGCCTCCTCCGGTTGTTGCTCAGCCGAGTTCTGCTGATTTTGGGGACTGTGGGGACCTGGGGTCCGGCGAGCCTGCGAGAACCCTGAAGCGGCCGCGCCTGGTCTGGACTCCACAGCTCCACAAGCGATTTGTTGATGCTGTCGCCCATTTGGGGATAAAAAATGCTGTCCCGAAAACCATAATGCAGTTGATGAGCGTCGATGGGTTAACTCGTGAAAACGTAGCTAGCCATTTGCAGAAATACCGTCTCTATTTGAAGCGTATGCAGGGGATTTCCAGCGGTAGCGGTGGCGGTGGTGGTGCTAATGGCGCCGCCGCTTCAGATCTTGCTACTGATCATTTGTTCGCGAGCTCCCCTGTTCCGCCTCATTTTCTTCACTCTTCTCGGACTAATTCCGACCATTTCTTGCCGTTTGTACCCGTTGGAGCTCTGCAGCAGCACCACCACATGGCCGCCGCCGCCGCCGCCGCTCAGTACCACCGGCAAGTGGCTCAGTTTGGGTCGCCGCCAAATGGGCAATTTGAGCGTCCGTTTCTGGCTCGGCCTATTCACCGGCTTGGGGCTCCGGTGAGTAACCCGGCGACGAATCACAGCGAAGATTTGGATTCGGGTAATGCAACAGAAGCGAGGAAGGTTCTTACTCTTTTCCCCACCGGAAACGATTAA | 840 | 54.76 | MREEDSNWFSKWEEELPSPEELMPLSQTLITPDLAVAFDISSSNAAIDNNSHPPPPPPPPPVVAQPSSADFGDCGDLGSGEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGISSGSGGGGGANGAAASDLATDHLFASSPVPPHFLHSSRTNSDHFLPFVPVGALQQHHHMAAAAAAAQYHRQVAQFGSPPNGQFERPFLARPIHRLGAPVSNPATNHSEDLDSGNATEARKVLTLFPTGND | 279 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
14 | 2385588 | 2386427 | - | Carg03501-RA | Car14g00453 | 160355 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Car14g00453 | 279 | MobiDBLite | consensus disorder prediction | 41 | 67 | - | - | |
Car14g00453 | 279 | MobiDBLite | consensus disorder prediction | 50 | 65 | - | - | |
Car14g00453 | 279 | Pfam | Myb-like DNA-binding domain | 92 | 140 | IPR001005 | - | |
Car14g00453 | 279 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 93 | 144 | IPR017930 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Car07g01077 | Car-Chr7:6393751 | Car14g00453 | Car-Chr14:2385588 | 4.65E-116 | dispersed | |
Car13g00081 | Car-Chr13:593304 | Car14g00453 | Car-Chr14:2385588 | 1.84E-35 | dispersed | |
Car14g00453 | Car-Chr14:2385588 | Car20g00334 | Car-Chr20:1908981 | 8.73E-32 | dispersed | |
Car03g00998 | Car-Chr3:8012189 | Car14g00453 | Car-Chr14:2385588 | 2.63E-119 | transposed | |
Car14g00453 | Car-Chr14:2385588 | Car06g00019 | Car-Chr6:195641 | 2.03E-131 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
4638 | PF00249 | Myb_DNA-binding | 2.00E-08 | CL0123 | Car | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Car14g00453 | - | - | csv:101216059 | 401.749 |