Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car14g00453 ATGAGGGAAGAGGATTCAAATTGGTTCTCAAAATGGGAAGAGGAGCTTCCTTCTCCTGAGGAATTGATGCCTCTTTCCCAAACCCTTATCACCCCTGATCTTGCTGTGGCATTTGACATATCGAGCTCAAATGCTGCCATTGATAACAACAGCCATCCGCCACCGCCGCCGCCGCCTCCTCCGGTTGTTGCTCAGCCGAGTTCTGCTGATTTTGGGGACTGTGGGGACCTGGGGTCCGGCGAGCCTGCGAGAACCCTGAAGCGGCCGCGCCTGGTCTGGACTCCACAGCTCCACAAGCGATTTGTTGATGCTGTCGCCCATTTGGGGATAAAAAATGCTGTCCCGAAAACCATAATGCAGTTGATGAGCGTCGATGGGTTAACTCGTGAAAACGTAGCTAGCCATTTGCAGAAATACCGTCTCTATTTGAAGCGTATGCAGGGGATTTCCAGCGGTAGCGGTGGCGGTGGTGGTGCTAATGGCGCCGCCGCTTCAGATCTTGCTACTGATCATTTGTTCGCGAGCTCCCCTGTTCCGCCTCATTTTCTTCACTCTTCTCGGACTAATTCCGACCATTTCTTGCCGTTTGTACCCGTTGGAGCTCTGCAGCAGCACCACCACATGGCCGCCGCCGCCGCCGCCGCTCAGTACCACCGGCAAGTGGCTCAGTTTGGGTCGCCGCCAAATGGGCAATTTGAGCGTCCGTTTCTGGCTCGGCCTATTCACCGGCTTGGGGCTCCGGTGAGTAACCCGGCGACGAATCACAGCGAAGATTTGGATTCGGGTAATGCAACAGAAGCGAGGAAGGTTCTTACTCTTTTCCCCACCGGAAACGATTAA 840 54.76 MREEDSNWFSKWEEELPSPEELMPLSQTLITPDLAVAFDISSSNAAIDNNSHPPPPPPPPPVVAQPSSADFGDCGDLGSGEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGISSGSGGGGGANGAAASDLATDHLFASSPVPPHFLHSSRTNSDHFLPFVPVGALQQHHHMAAAAAAAQYHRQVAQFGSPPNGQFERPFLARPIHRLGAPVSNPATNHSEDLDSGNATEARKVLTLFPTGND 279
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 2385588 2386427 - Carg03501-RA Car14g00453 160355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car14g00453 279 MobiDBLite consensus disorder prediction 41 67 - -
Car14g00453 279 MobiDBLite consensus disorder prediction 50 65 - -
Car14g00453 279 Pfam Myb-like DNA-binding domain 92 140 IPR001005 -
Car14g00453 279 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 93 144 IPR017930 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car07g01077 Car-Chr7:6393751 Car14g00453 Car-Chr14:2385588 4.65E-116 dispersed
Car13g00081 Car-Chr13:593304 Car14g00453 Car-Chr14:2385588 1.84E-35 dispersed
Car14g00453 Car-Chr14:2385588 Car20g00334 Car-Chr20:1908981 8.73E-32 dispersed
Car03g00998 Car-Chr3:8012189 Car14g00453 Car-Chr14:2385588 2.63E-119 transposed
Car14g00453 Car-Chr14:2385588 Car06g00019 Car-Chr6:195641 2.03E-131 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
4638 PF00249 Myb_DNA-binding 2.00E-08 CL0123 Car TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car14g00453 - - csv:101216059 401.749