Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car14g00465 ATGGGTAGTAGAACAGTGAAGGTTGGTGCCGACGATATAAACAAAAAGGTGAACGGGATGCCTAGCTTCGTTTCTTCGATGCCCACAGCCAATAATTCCATGGGTGCAGAGGGGAGCTCTATTCCTTCATCTCGGATTTCGGACTTAAGAACGCTCGAGCAAACTCTTGGATTTCACATAGAAAATGTAGACCTTACTAGAAATCCTTTGTATAATCAGATAAAGTCGAATAGTTCGACTCTGAACAACAACATCCAGTTTGGTTCTTTAATTAAGCCACTTGCATCCACTGATGTAAATCTACCAACTGCTATCATGGGCTCTCAAACATTGCCATTACAGAAAGAATCAAATCCAAATTTGGTTTCTACGTCGGGTGGTCCTCATGAAAACTGGGGAGAGTCTAACATGGCCGACGTCAGCACAAGAACTGATACCTCCACGGATGACACAGATGACAAAAGTCAAAGGCTTGACAAGGATCAAGGAAACTCACTTGTCGTGTACGATTCTAGCAACAAATCGAAAGAAAAAACACCTGATCAGAAGAGCTTACGAAGGCTTGCCCAAAATCGTGAAGCTGCTAGAAAAAGTCGTTTAAGGAAAAAAGCGTACGTGCAGCAGCTAGAAAGTAGCAGGCTGAAGCTTACTCAACTTGAGCAAGAACTCCAGCGGGCCCGCCAGCAGGGTATATTTATTTCAAATTCTGGAGACCAAGCTCATTCAATGAGTGGAAATGGGGCCCTAGCGTTTGATGCAGAATATTCACGTTGGTTAGAGGAGCATAACAGGCTGATAAATGAGCTTAGAGCTGCAGTTAATTCACATGCGGGCGACACTGAACTTCGAACTGTCGTTGATAACGTGACTACACAGTTCGACGATATTTTCAGGTTGAAAGGCATTGCAGCCAAAGCTGATGTGTTCCACATCTTGTCAGGAATGTGGAAGACACCAGCAGAGCGGTGTTTTCTGTGGATTGGTGGCTTCCGTTCATCAGAGATCCTGAAGCTTCTTATAAACCAATTAGAGCCTTTGACTGAGCAGCAGCTAATGGGCATATGTAACCTGCAACAATTATCACAACAAGCAGAAGATGCTCTCTCGCAAGGAATGGATGCATTGCAGCAATCCTTGGCTGAAACATTGGCCAGTGGCACACCTGCAACGTCGGGATCGTCTGGGAACGTCGCAAATTATATGGGTCAAATGGCCATGGCTATGGGAAAGCTTGGAACTCTTGAAGGCTTCCTACGCCAGGCTGATAATCTTCGTCAACAAACTCTTCAACAAATGCATCGCATATTGACAACCCGTCAATCAGCTCGTGCGCTTCTTGCAATAAACGACTACTTCTCCCGCCTTAGAGCCCTCAGCTCTCTCTGGCTTGCACGGCCTCGAGAGTGA 1407 45.56 MGSRTVKVGADDINKKVNGMPSFVSSMPTANNSMGAEGSSIPSSRISDLRTLEQTLGFHIENVDLTRNPLYNQIKSNSSTLNNNIQFGSLIKPLASTDVNLPTAIMGSQTLPLQKESNPNLVSTSGGPHENWGESNMADVSTRTDTSTDDTDDKSQRLDKDQGNSLVVYDSSNKSKEKTPDQKSLRRLAQNREAARKSRLRKKAYVQQLESSRLKLTQLEQELQRARQQGIFISNSGDQAHSMSGNGALAFDAEYSRWLEEHNRLINELRAAVNSHAGDTELRTVVDNVTTQFDDIFRLKGIAAKADVFHILSGMWKTPAERCFLWIGGFRSSEILKLLINQLEPLTEQQLMGICNLQQLSQQAEDALSQGMDALQQSLAETLASGTPATSGSSGNVANYMGQMAMAMGKLGTLEGFLRQADNLRQQTLQQMHRILTTRQSARALLAINDYFSRLRALSSLWLARPRE 468
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 2438490 2445596 - Carg03489-RA Car14g00465 160367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car14g00465 468 SUPERFAMILY Leucine zipper domain 183 226 IPR046347 GO:0003700|GO:0006355
Car14g00465 468 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 181 225 IPR004827 GO:0003700|GO:0006355
Car14g00465 468 SMART brlzneu 179 242 IPR004827 GO:0003700|GO:0006355
Car14g00465 468 Pfam bZIP transcription factor 183 223 IPR004827 GO:0003700|GO:0006355
Car14g00465 468 Pfam Seed dormancy control 266 340 IPR025422 GO:0006351|GO:0043565
Car14g00465 468 MobiDBLite consensus disorder prediction 110 199 - -
Car14g00465 468 MobiDBLite consensus disorder prediction 145 160 - -
Car14g00465 468 Gene3D - 182 234 - -
Car14g00465 468 Coils Coil 202 229 - -
Car14g00465 468 ProSiteProfiles DOG1 domain profile. 248 465 IPR025422 GO:0006351|GO:0043565
Car14g00465 468 PANTHER TRANSCRIPTION FACTOR TGA9 63 468 - -
Car14g00465 468 MobiDBLite consensus disorder prediction 174 195 - -
Car14g00465 468 CDD bZIP_HBP1b-like 183 234 - -
Car14g00465 468 MobiDBLite consensus disorder prediction 110 144 - -
Car14g00465 468 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 186 201 IPR004827 GO:0003700|GO:0006355
Car14g00465 468 PANTHER TRANSCRIPTION FACTOR TGA2.3-LIKE ISOFORM X1 63 468 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car04g02000 Car-Chr4:15511000 Car14g00465 Car-Chr14:2438490 4.05E-167 dispersed
Car06g00014 Car-Chr6:153793 Car14g00465 Car-Chr14:2438490 0 dispersed
Car06g00074 Car-Chr6:464387 Car14g00465 Car-Chr14:2438490 4.20E-130 dispersed
Car12g00121 Car-Chr12:640069 Car14g00465 Car-Chr14:2438490 0 dispersed
Car13g00483 Car-Chr13:7055242 Car14g00465 Car-Chr14:2438490 3.06E-10 dispersed
Car14g00399 Car-Chr14:2012271 Car14g00465 Car-Chr14:2438490 1.35E-113 dispersed
Car14g00465 Car-Chr14:2438490 Car15g00850 Car-Chr15:4944132 4.88E-164 dispersed
Car14g00465 Car-Chr14:2438490 Car04g01398 Car-Chr4:8104388 0 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
4640 PF14144 DOG1 2.20E-29 No_clan Car TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car14g00465 K14431 - csv:101219149 850.121