Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car14g00475 ATGGTTATGGCTGCCGATTCTCAGTTCCATGTTCTTGCCGTCGATGATAGCCTCATAGATAGGAAGCTTATCGAGAGGCTGCTCAAAACCTCCTCATATCAAGTTACTACGGTTGATTCAGGGAGCAAGGCCTTGGAATTTCTGGGTTTGATTGAAGAACATCAGCGTACAAACTTCAAATCTCCTTCTTCTTCTTCTTCTTCCTCCTCGAACATTCATCATCAGGAAGTGGAAGTGAATCTTATCATTACTGATTACTGCATGCCTGGGATGACTGGCTTCGATTTGCTCAAGAAAGTTAAGGAATCGACGTCTCTTAGAAACATACCAGTGGTGATAATGTCATCCGAAAATTTACCTTCGAGAATCAGCAGATGTTTAGAAGAAGGCGCGGAAGAGTTCTTCCTGAAGCCAGTTCGATTGTGCGATGTGAATAAACTGAAACCACACATAATGAAGACGAAATTCAAGGATCAAAATCAAGAAGAAGAAGAAGAAGAAACAACAGAGACCGAATTCGAATCGGTTGAAAAACAACAACAGATTCAAATGAACAGTAACAACAAGAGAAAGGCGGGGATGGATGAAGAAGGTGTAGGAGAGGACAGAAGAAGAAGAATAAGGTACAATAGCAATGGCGTCGCGACTGTGAATTGA 657 41.86 MVMAADSQFHVLAVDDSLIDRKLIERLLKTSSYQVTTVDSGSKALEFLGLIEEHQRTNFKSPSSSSSSSSNIHHQEVEVNLIITDYCMPGMTGFDLLKKVKESTSLRNIPVVIMSSENLPSRISRCLEEGAEEFFLKPVRLCDVNKLKPHIMKTKFKDQNQEEEEEETTETEFESVEKQQQIQMNSNNKRKAGMDEEGVGEDRRRRIRYNSNGVATVN 218
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 2529750 2531553 + Carg03479-RA Car14g00475 160377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car14g00475 218 MobiDBLite consensus disorder prediction 175 189 - -
Car14g00475 218 MobiDBLite consensus disorder prediction 190 209 - -
Car14g00475 218 Pfam Response regulator receiver domain 11 141 IPR001789 GO:0000160
Car14g00475 218 ProSiteProfiles Response regulatory domain profile. 10 152 IPR001789 GO:0000160
Car14g00475 218 MobiDBLite consensus disorder prediction 156 218 - -
Car14g00475 218 Coils Coil 159 179 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car07g01312 Car14g00475 CCT
Car03g00131 Car14g00475 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car04g00094 Car-Chr4:529756 Car14g00475 Car-Chr14:2529750 3.15E-51 dispersed
Car04g01409 Car-Chr4:8188978 Car14g00475 Car-Chr14:2529750 7.81E-40 dispersed
Car04g01645 Car-Chr4:9472102 Car14g00475 Car-Chr14:2529750 2.38E-52 dispersed
Car04g02124 Car-Chr4:17295013 Car14g00475 Car-Chr14:2529750 3.74E-69 dispersed
Car04g02296 Car-Chr4:18440015 Car14g00475 Car-Chr14:2529750 5.45E-58 dispersed
Car07g01312 Car-Chr7:8186531 Car14g00475 Car-Chr14:2529750 9.80E-68 dispersed
Car10g00145 Car-Chr10:689625 Car14g00475 Car-Chr14:2529750 1.62E-48 dispersed
Car14g00475 Car-Chr14:2529750 Car15g00784 Car-Chr15:4455898 7.53E-72 dispersed
Car14g00475 Car-Chr14:2529750 Car03g00131 Car-Chr3:2281271 2.80E-80 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
4641 PF00072 Response_reg 1.00E-16 CL0304 Car TR
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car14g00475 K14492 - csv:101220810 308.145