Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car14g00488 ATGGGTGTCTTAGTTTCTCTCTTCAAGCAGAGGGGTTTTATCATTTTCTTGAATCTCTCGTTTCTATCAGTGGCGGCTTGTGCTTTTTTTGCCATTCGTTTTCATCCTCCAGAATCCTATTTCCACGTTCTTAACAAAAGCTCGAGAAGAATCCATGGAAGCCCACAGGATGATTGCCGGAGTTTTCTTGGTCTAACTGATTTTGAAGCTAAGTGCTCTGTTCTTAAATCCAGCAACCCTTGTAACACCCAAGGCTATATAGATTATCTTTACATTTTCTATTGTCAGTATGGAAGTTTTAGCATTCTGGGGTATACTCTGCTGTTTCTGTGGCTTCTTGTGTTGTTCTATCTTCTGGGTAATACTGCCTCTGAATACTTTTGTTCTTCCCTTGAGAGCTTGTCAAAAGTGTTGAATCTGTCCCCTACAATTGCTGGTGTTACTCTGCTTTCTCTTGGCAATGGGGCACCTGATGTTTTTGCTAGCCTTGTTGCCTTTATGGGGGATGGAACTAGTGATATTGGATTGAATACTGTTCTTGGTGGAGCTTCGTTTGTTACCTGTGTCGTCGTCGGAATCATAAGCATTTTGCTGCGTCGGCGACGAATTAAGGTGAATAGGTCTGGCTTCATTAGAGATGTTTTGTTCTTCCTCTTGGTTCTTTTGTCTGTTTTCTTCATACTGCTTCATGGTCATATCAATCTATGGGGTGCCATTGGGTTTTCTTCCATGTATATTGTTTATGTTTTGGCTGTTTATGTCTCCCATGCTCAATGGTTGAGTTTTAGAAGTGATATCTGTGAACCCCTTTTGAAAGAGCCACCAAAGGATGAGTTTGAGGGTGTAAATGAATCACGGTACAACGATGACAACGACGACGATAACGATGATGTTAGGATCGATGTATATGATCTCTGTTTTTGTCCAAGATTATCGCCTTCGTGTCTCGTTTTCCTTCGCATTCTTGAGATTCCTCTTTACTTGCCTAGAAGATTGACAATTCCAGCCATTGCTGAAGAAAACTGGTCTAGACCATATGCAGTTGCTTCAGTGATATTGGCTCCTCTTCTCTTATCTGTTCTATGGGCCTTTCACCACCAAACCGACGCGACACAGTCGAACCTGATCATCTGTGTCGTCGCTTTGCTGCTCGGGATTAGTTTTGGGATTGTTGCATTTGCAACAACTGAGAATTCAACCCCACCAAAGAAATGCTTGTTCCCGTGGCTAGCAGCTGGCTTCACCATGAGTTTAACATGGAGTTACATTCTAGCTCAGGAACTAGTAGGCCTATTGGTTTCACTTGGCTACATAATGAACATAAGCCCTTCAATCCTAGGACTTACCTTCCTAGCCTGGGGGAACTCTCTTGGGGATTTAGTTGCCAATGTGACCATGGCATTGAACGGCGGGCAGCGAGGCGCTCAAATCGCCATCTCCGGCTGCTATGCCGGTCCCATCTTCAACACTTTGTTCGGCCTAGGAATGTCCCTCGTCGGCGCATCGTGGAAGAAGTATCCTCAGTCGATCGCCATCCCTCCCGACCCGTATGTGATGGAGACATTGGGGCTGTTAGTCGGCGGGTTGCTTTGGGCACTCGTGGCCTTGCCAAGGCGAGAGATGAGGCTTGATGCAGTGTTGGGCGGAGGCCTTTTGGCTATCTACTTGACCTCTTTGCTCTTAAGGCTGTTGCAAGCTTTTGCTTCCTCCCATTAG 1716 45.28 MGVLVSLFKQRGFIIFLNLSFLSVAACAFFAIRFHPPESYFHVLNKSSRRIHGSPQDDCRSFLGLTDFEAKCSVLKSSNPCNTQGYIDYLYIFYCQYGSFSILGYTLLFLWLLVLFYLLGNTASEYFCSSLESLSKVLNLSPTIAGVTLLSLGNGAPDVFASLVAFMGDGTSDIGLNTVLGGASFVTCVVVGIISILLRRRRIKVNRSGFIRDVLFFLLVLLSVFFILLHGHINLWGAIGFSSMYIVYVLAVYVSHAQWLSFRSDICEPLLKEPPKDEFEGVNESRYNDDNDDDNDDVRIDVYDLCFCPRLSPSCLVFLRILEIPLYLPRRLTIPAIAEENWSRPYAVASVILAPLLLSVLWAFHHQTDATQSNLIICVVALLLGISFGIVAFATTENSTPPKKCLFPWLAAGFTMSLTWSYILAQELVGLLVSLGYIMNISPSILGLTFLAWGNSLGDLVANVTMALNGGQRGAQIAISGCYAGPIFNTLFGLGMSLVGASWKKYPQSIAIPPDPYVMETLGLLVGGLLWALVALPRREMRLDAVLGGGLLAIYLTSLLLRLLQAFASSH 571
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 2620009 2621724 + Carg03466-RA Car14g00488 160390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car14g00488 571 Pfam Sodium/calcium exchanger protein 410 561 IPR004837 GO:0016021|GO:0055085
Car14g00488 571 Pfam Sodium/calcium exchanger protein 109 253 IPR004837 GO:0016021|GO:0055085
Car14g00488 571 Gene3D - 140 265 IPR044880 -
Car14g00488 571 Gene3D - 349 563 IPR044880 -
Car14g00488 571 PANTHER CATION/CALCIUM EXCHANGER 2 16 569 - -
Car14g00488 571 PANTHER NA+/CA2+ K+ INDEPENDENT EXCHANGER 16 569 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car10g00695 Car-Chr10:3599728 Car14g00488 Car-Chr14:2620009 2.84E-43 dispersed
Car11g00616 Car-Chr11:3354806 Car14g00488 Car-Chr14:2620009 9.13E-48 dispersed
Car10g00936 Car-Chr10:7419424 Car14g00488 Car-Chr14:2620009 2.25E-51 transposed
Car14g00488 Car-Chr14:2620009 Car06g00754 Car-Chr6:5216029 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car14g00488 K13754 - csv:101204766 957.207