Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Car14g00512 | ATGCAGGTTCTAACAACAAGGGTCGGCGGCGTAGGGCTGCTGGTGGCTGCGGCGGTGGTTATGCTGACGGAAATGCCGGAAGTTTCGGCGACACGGTGGACTGTCGGTGGCAAGATGGGTTGGACGACCAATGTGAACTACACAATCTGGGCTGAGGGAAAACACTTCTATTACGATGACTGGCTCTTTTTTGTGTACGACAGGAACCAAATGAATGTGTTGGAGGTGAACAAAACAGAGTATGAGAATTGCAATTCCGATCAGCCACTCCATAATTTCACCACCGGAGCTGGAAGAGATGTGGTTCATTTGAATGTCACCAGACCTTATTACTTCATTAGCGGTAAAGGGTTTTGCTACGGAGGCATGAAGCTCGCTATCCATGTCCGGCACCTGCCTCCGCCGCCCTCGGCCTCCCCCTTCAACGCTAAGAACAGTGCTCTGAGATCTTCTTACATCGGCCATACCCCATGCGTCTTGACCGCTGTTTTCTCCATCGCCGCTCTCCGGGAAGCTTTCCGCCGATTCTGGTAG | 534 | 52.43 | MQVLTTRVGGVGLLVAAAVVMLTEMPEVSATRWTVGGKMGWTTNVNYTIWAEGKHFYYDDWLFFVYDRNQMNVLEVNKTEYENCNSDQPLHNFTTGAGRDVVHLNVTRPYYFISGKGFCYGGMKLAIHVRHLPPPPSASPFNAKNSALRSSYIGHTPCVLTAVFSIAALREAFRRFW | 177 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 14 | 2811302 | 2811920 | - | Carg09807-RA | Car14g00512 | 160414 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Car14g00512 | 177 | ProSiteProfiles | Phytocyanin domain profile. | 31 | 131 | IPR003245 | GO:0009055 | |
| Car14g00512 | 177 | Pfam | Plastocyanin-like domain | 41 | 123 | IPR003245 | GO:0009055 |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Car08g00831 | Car-Chr8:5558158 | Car14g00512 | Car-Chr14:2811302 | 7.70E-10 | dispersed | |
| Car11g00976 | Car-Chr11:6517942 | Car14g00512 | Car-Chr14:2811302 | 5.58E-77 | dispersed | |
| Car11g00977 | Car-Chr11:6521317 | Car14g00512 | Car-Chr14:2811302 | 5.10E-36 | dispersed | |
| Car14g00512 | Car-Chr14:2811302 | Car14g00951 | Car-Chr14:5753090 | 1.51E-24 | dispersed | |
| Car14g00512 | Car-Chr14:2811302 | Car02g01280 | Car-Chr2:8571649 | 3.90E-11 | transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Car14g00512 | - | - | cmos:111442083 | 339.732 |