Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car14g00515 ATGGCGACCTCAAAACCTCAAAGGTCACCTGAGGAGGTTGAAGACATTATTCTTCGTAAGGTCTTCCTTGTCTCTCTCACCGGTTCTTCCGATTCCGATTCTCGGATCGTCTATCTCGAGCAAACCGCCGCCGAACTCCTTAGCGAGAGCAAGCAATTGAGGATTTCAAGAGATGTGATGGAGCGCCTCATAATCGATCGCCTTTCCGGAAATTTCCCATCCGCGGAGCCCCCTTTTCAGTACCTAATCGGTTGCTACCGTCGAGCTCACGACGAGAGTAAGAAAATTGCTTCTATGAAGGATAAGAATTTGCGTTCTGATATTGAAATTGCGCTCAAGCAAGCCAAGAAGTTGGCGATTTCGTATTGTAGGATTCATTTGGGGAATCCTGAATTGTTTTCGGCTGGGGATTTGGGTGCTGAGTCCAACACTTCGCCTTTGCTTCCGTTGGTTTTCTCTGAGGTTGGGGGCTCCGTGGATGGATTTGGGTCTACTAGCAGCGTTGGTGGTCTTCAGTGCCCTCCTGGTTTCTTGGAGGAGTTTCTACGTGACTCGGATTTTGATACATTAGACCCTATCTTGAAGGGGTTGTATGAGGATTTAAGGGGTGGTGTCCTTAAAGTTTCGGCTCTTGGGAATTTCCAGCAGCCTTTAAGGGCACTTAGGTTTCTGGTCAGTTTTCCTGTTGGTGCTAAATCTCTTGTAAATCACCCTTGGTGGATTCCCACCGGAAAATATTCCAATGGGCGTGTCATTGAGATGACAAGCATTTTGGGGCATTTCTTCCATGTCAGTGCTCTGCCTGACCATGCCATTTTTAAGAGCCAACCTGATGTTGGGCAACAGTGCTTTTCAGAAGCATCCACTCGTAGACCAACTGATTTACTTTCTTCATTCACTACAATTAAAACTGTCATGAATAGCTTATATGATGGCCTTGCGGAAGTTCTTCTCTCCCTTCTTAAGAACACAGAGACCCGTGAAAATGTTCTCGAGTATCTTGCAGAGGTGATAAATAGAAACTCATCAAGGGCTCATATACAGGTTGATCCTCTCTCCTGTGCAAGTTCGGGGATGTTTGTTAATCTCAGTGCCATCATGCTACGTCTCTGTGAGCCATTTCTAGATGCAAACTTGACTAAAAGGGATAAAATTGATCCAAAATATGTATGTTATGGTAACCGCTTGGAGCTTAGAGGATTAACTGCTCTACATGCTTCATCGGAAGAAGTGACCGAGTGGATTAATAATGGTACTCAGTTGAATAATGATAACTCCGGGCAGTTCAGCGACAGTGAAAGTCGCTTGCTGCAATCCCAAGAAGCTTCCAGTTCTGGCAGTAATGCTACTACTGGATCTTCTACTGCAAAGGCAAGATCGAGTAGTGATAAAACTAGGTACCCTTTCATATGTGAGTGCTTCTTTATGACTGCAAGGGTGCTGAATTTGGGCTTGTTAAAAGCATTTTCAGACTTCAAACATTTAGTACAGGATATATCTAGGTGTGAAGATACATTGTCCACACTCAAAGCCATGCAAGGACAAGGGCCCGCCCCACAACTTGAAATTGATATAGCTCGCCTTGAGAAGGAAATAGAGTTGTACTCACAGGAAAAGCTTTGTTATGAAGCTCAAATACTGAGGGATGGGACACTAATCCAACAAGCTCTTACTTTCTATCGATTGATGGTTGTCTGGTTAGTTGGTTTGGTTGGTGGATTTAAAATGCCTCTTCCATCAACTTGCCCAATGGAATTTGCATCCATGCCAGAACATTTTGTGGAAGATGCAATGGAATTGCTTATATTTGCTTCTCGGATTCCGAAAGCTTTGGATGGAATCAATTTGGATGATTTTATGAACTTCATTATTATGTTTATGGCAAGCCCAGAGTATATAAGAAATCCTTACTTAAGAGCAAAGATGGTTGAAGTTCTGAACTGCTGGATTCCTCGTAGAAGTGGTGCATCTGTAACAGCAACATTATTTGAAGGCCATCAACTATCGCTTGAATATCTTGTTAGGAATCTTTTAAAGCTTTACGTGGACATTGAGTTCACTGGTTCACATACACAGTTTTATGACAAGTTCAACATCCGTCATAATATTGCAGAACTTCTCGAATATCTTTGGCAGGTTCCAAGTCATCGCAGTGCTTGGAGAATGGTAACATTTGCTTCCTTTTCCTCTGTAATTTCTCGGTTGATTGCCATCATGGCTTTATCTTTACATGGCATTTCCCTTAATTTTTCATTCCAGATTGCCAAGGAAGAGGAGAAGGGTGTTTACTTGAATTTCTTGAACTTCCTAATCAATGATAGCATATATCTTCTTGATGAAAGCCTTAATAAGATTCTCGAACTTAAAGAGCTTGAAGCTGAAATGTCAAATACCGCAGAATGGGAACAGCGACCTGCTCAAGAGAGGCAGGAGAGAACTCGGCTGTTTCACTCCCAAGAAAATATCATTCGAATTGATATGAAATTAGCAAATGAGGATGTGAGTATGCTGGCATTTACGTCAGAGCAAATCACAGCTCCTTTCCTACTTCCAGAGATGGTCGAAAGGGTGGCCAGCATGCTTAATTATTTTCTCCTGCAACTTGTTGGTCCTCAACGAAGATCTCTTAGTCTGAAAGACCCCGAAAAGTACGAATTCCGTCCTAAAGAGTTGCTCAAGCAGATTGTTCACATGTATGTTCATCTGGCAAGAGGCGATACAGATAATATTTTCCCAGCTGCCATTTCAAAGGACGGGCGATCGTACAATGAGCAGTTGTTCAATGCTGCAGCAGTTGTACTTAGGCGAATTGGAGAGGATGGGAGGATCATACAGGAGTTTATTGCTCTTGGTAACAAAGCCAAGGATGCAGCTTCTGAGGCGATGGATGCTGAAGCTACTCTAGGAGATATACCGGACGAGTTCCTCGACCCAATCCAATACACTTTAATGAAGGACCCTGTGATCTTACCTTCTTCAAGGATCACGGTCGACAGACCCGTCATTCAAAGACATCTCCTCAGTGACAGCACCGATCCGTTCAACCGGTCTCATCTGACAGCAGACATGCTAATACCGAACGAAGAACTGAAAGCAAGAATCAAAGAATTTATCAGGTCACAAGAAATGAAGAAGCAACTGGACGGAGGAGGGGTTGCTATGCAGAGCAGCAAGACAACCATCCAACCCACAAACGGAGAGATGTTGATTGATTAA 3216 43.35 MATSKPQRSPEEVEDIILRKVFLVSLTGSSDSDSRIVYLEQTAAELLSESKQLRISRDVMERLIIDRLSGNFPSAEPPFQYLIGCYRRAHDESKKIASMKDKNLRSDIEIALKQAKKLAISYCRIHLGNPELFSAGDLGAESNTSPLLPLVFSEVGGSVDGFGSTSSVGGLQCPPGFLEEFLRDSDFDTLDPILKGLYEDLRGGVLKVSALGNFQQPLRALRFLVSFPVGAKSLVNHPWWIPTGKYSNGRVIEMTSILGHFFHVSALPDHAIFKSQPDVGQQCFSEASTRRPTDLLSSFTTIKTVMNSLYDGLAEVLLSLLKNTETRENVLEYLAEVINRNSSRAHIQVDPLSCASSGMFVNLSAIMLRLCEPFLDANLTKRDKIDPKYVCYGNRLELRGLTALHASSEEVTEWINNGTQLNNDNSGQFSDSESRLLQSQEASSSGSNATTGSSTAKARSSSDKTRYPFICECFFMTARVLNLGLLKAFSDFKHLVQDISRCEDTLSTLKAMQGQGPAPQLEIDIARLEKEIELYSQEKLCYEAQILRDGTLIQQALTFYRLMVVWLVGLVGGFKMPLPSTCPMEFASMPEHFVEDAMELLIFASRIPKALDGINLDDFMNFIIMFMASPEYIRNPYLRAKMVEVLNCWIPRRSGASVTATLFEGHQLSLEYLVRNLLKLYVDIEFTGSHTQFYDKFNIRHNIAELLEYLWQVPSHRSAWRMVTFASFSSVISRLIAIMALSLHGISLNFSFQIAKEEEKGVYLNFLNFLINDSIYLLDESLNKILELKELEAEMSNTAEWEQRPAQERQERTRLFHSQENIIRIDMKLANEDVSMLAFTSEQITAPFLLPEMVERVASMLNYFLLQLVGPQRRSLSLKDPEKYEFRPKELLKQIVHMYVHLARGDTDNIFPAAISKDGRSYNEQLFNAAAVVLRRIGEDGRIIQEFIALGNKAKDAASEAMDAEATLGDIPDEFLDPIQYTLMKDPVILPSSRITVDRPVIQRHLLSDSTDPFNRSHLTADMLIPNEELKARIKEFIRSQEMKKQLDGGGVAMQSSKTTIQPTNGEMLID 1071
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 2819819 2827187 + Carg09804-RA Car14g00515 160417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car14g00515 1071 Pfam Ubiquitin elongating factor core 258 954 IPR019474 GO:0000151|GO:0006511|GO:0016567|GO:0034450
Car14g00515 1071 Coils Coil 518 545 - -
Car14g00515 1071 ProSiteProfiles U-box domain profile. 970 1044 IPR003613 GO:0004842|GO:0016567
Car14g00515 1071 Pfam U-box domain 971 1042 IPR003613 GO:0004842|GO:0016567
Car14g00515 1071 MobiDBLite consensus disorder prediction 422 460 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car11g00967 Car-Chr11:6377278 Car14g00515 Car-Chr14:2819819 0 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car14g00515 K10597 - csv:101211398 1894.01