Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car14g00516 ATGGGGATTAAATTTTCGAAGCAAGGTCAGGGGAAGGTTGAAAACCTTAGTTTGCAACACCACCTGATGAATTATCTATCCAAAAAATTTTACATCCGTAACTTGGTATCCAAGCAAAGGAGGCGCATGCTTGTTGCTGGCTATGATCTTGACATGTCATACATTACGGATCATATTCTGGCAATGTCATTCCCTGCGGAACGGATGCGTGCTATGTATCGTAATCCCCTATGGCAGGTTAAGTCCGTATTGGACATGAGGCATCAGGGACATTACAAGGTTAAGTCCGTATTGGACATGAGGCATCAGGGACATTACAAGATCTATAATCTCTGTATTGAAGAATCATATGATCCATCACATTTTCATGGGCGCGTGGAGTCATTTCCTTTTGATGATAATCATGTTCCACCGCTACAGATGATCAAACTCTTCTGTGAAAATGTCTCTTCATGGATATCATCCCACCCAAAGAATATTGCGGTTATACACTGCATGGCTGGGAAAGGTCGAACCGGATTAATGGTATGTGCCTACTTGGTTTACTGTGGCATGTCAGTGGAGGATGCACTTCACCTGTATGCTCAGAGGCGGACGACCAATAATGAAGGAGTATCAATTCCAAGCCAACGGCGGTATGTTGGCTACTGGGCAAAGTGCCTTTCCTTTCCCAAGGGGATTTATAATGGATCTCCTGAGGTGAAGTTGCCCATACCCTGTAGGAGAGAGTTGCAGAGAATTCGTCTTTATGACACAGTTAACACTGAATCAATTTTCTTTGTGGTCTCAGAATTGCAGGAGGTTCCTTCTCAGCTATACCGTCCATCTATGGAACGTACCCGGAGTTGTTGCAGACAATTTAAGAGTGGTTATGAGAGCAGTAACAGTCCTCGCGAAAATGAAGAGAACAAGTCGGAAGTAGAGCCCCATTTTATTGTTCAGATGGATACAGAGTGTTCAGCACTATACCACAAAACCTGCCTTGACTACAATTTTGAGAAGCCTTTACCTCTAACTGGAGATGTGCGCATCATATTCTACGCAAAGATGTTTGGAGGGCGTCTGTTCTATGCTTGCTTCAACTCAGCTTTCATTAAAAACAGCTTGATACAGCTAAGGTTGCAGGATTTGGACAAAGTTGGGAAAAGGGGAAGGTCGATTTGTGGTCCATCCTTCTGCTTGGAGTTGGTATTTGGTCCTGCCAATGCAAAACACTCATTTTCGACTTCGTCCGAAGACGAATGCCCTAGATATGATTCGTCTTAA 1266 43.68 MGIKFSKQGQGKVENLSLQHHLMNYLSKKFYIRNLVSKQRRRMLVAGYDLDMSYITDHILAMSFPAERMRAMYRNPLWQVKSVLDMRHQGHYKVKSVLDMRHQGHYKIYNLCIEESYDPSHFHGRVESFPFDDNHVPPLQMIKLFCENVSSWISSHPKNIAVIHCMAGKGRTGLMVCAYLVYCGMSVEDALHLYAQRRTTNNEGVSIPSQRRYVGYWAKCLSFPKGIYNGSPEVKLPIPCRRELQRIRLYDTVNTESIFFVVSELQEVPSQLYRPSMERTRSCCRQFKSGYESSNSPRENEENKSEVEPHFIVQMDTECSALYHKTCLDYNFEKPLPLTGDVRIIFYAKMFGGRLFYACFNSAFIKNSLIQLRLQDLDKVGKRGRSICGPSFCLELVFGPANAKHSFSTSSEDECPRYDSS 421
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 2830902 2836002 - Carg09803-RA Car14g00516 160418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car14g00516 421 ProSiteProfiles C2 tensin-type domain profile. 255 401 IPR014020 -
Car14g00516 421 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 143 198 IPR000387 GO:0016311|GO:0016791
Car14g00516 421 Pfam C2 domain of PTEN tumour-suppressor protein 319 398 IPR014020 -
Car14g00516 421 Pfam Tyrosine phosphatase family 157 200 IPR026893 GO:0004721
Car14g00516 421 ProSitePatterns Tyrosine specific protein phosphatases active site. 163 173 IPR016130 GO:0016311|GO:0016791
Car14g00516 421 ProSiteProfiles Phosphatase tensin-type domain profile. 41 224 IPR029023 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car11g00965 Car-Chr11:6360529 Car14g00516 Car-Chr14:2830902 0 dispersed
Car12g00563 Car-Chr12:3766505 Car14g00516 Car-Chr14:2830902 1.12E-41 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car14g00516 K01110 - csv:101212127 749.969