Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Car14g00535 | ATGGACTTGACTCCTGCGATTTCCACCGCCGTCGCCGCCATTACCACCGGCGGAGGACCTGTCAAATCCCCTGAATTAGACACCGACACGCCCATCAAAATCCAACCCACCACCGAATCTCACCCTTTCACCAACGGTGTCCTCAAGCGCCACCATAACACCCCACCGCCTGTCGTCTACAAAGAATGCCTCAAGAATCACGCCGCCAGTTTAGGTGCCCATGCTTTGGACGGCTGTGGCGAGTTCATGCCTTCCTCTACCGCCACCGCCTCCGATCCCACTTCCCTTAAATGCGCTGCTTGCGGCTGCCACCGGAATTTCCACCGCCGTGAGCCGGAGGACTCAATAGCCACCCCGACGACAACCCATATCATTGAGTACCAACCTCACCATCGTCACCACCCACCGCCACCTGCAGCAAATCGAAGCCCAAGCTCTGCCTCTCCTCCACCGATCTCCTCCTCCTACTACCCTTCAGCTCCCCACATGCTTCTTGCCCTTTCCGGCGGACTGCCGGAAAACGCCAGCGGTGGATTCCACCACTCGATTCTGACTCCAAGCCCCAATTCGAGAAAGCGATTCAGAACAAAATTCACTCAAAATCAAAAGGAAAAAATGTATGAATTTGCAGAAAAAGTGGGTTGGAAGATTCAAAAACGAGACGAGGATATGATCCAAGAATTCTGCAGCAACGTCGGAGTAGACAGAGGCGTTCTCAAAGTTTGGATGCACAACAACAAAAACACTTTGGGGAAAAAGGACGGCACCCAGAACACCAACGGCAGCGGTGGCGACGGCGACGGCGACGGCGACGGCGATGAGAAAATGAACGGCGGCAACGAGCCACACGCCGCCGCAAATGGGTCGTCTTCTTCATCTTGA | 882 | 54.88 | MDLTPAISTAVAAITTGGGPVKSPELDTDTPIKIQPTTESHPFTNGVLKRHHNTPPPVVYKECLKNHAASLGAHALDGCGEFMPSSTATASDPTSLKCAACGCHRNFHRREPEDSIATPTTTHIIEYQPHHRHHPPPPAANRSPSSASPPPISSSYYPSAPHMLLALSGGLPENASGGFHHSILTPSPNSRKRFRTKFTQNQKEKMYEFAEKVGWKIQKRDEDMIQEFCSNVGVDRGVLKVWMHNNKNTLGKKDGTQNTNGSGGDGDGDGDGDEKMNGGNEPHAAANGSSSSS | 293 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
14 | 2939620 | 2940501 | + | Carg09784-RA | Car14g00535 | 160437 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Car14g00535 | 293 | MobiDBLite | consensus disorder prediction | 248 | 293 | - | - | |
Car14g00535 | 293 | MobiDBLite | consensus disorder prediction | 249 | 264 | - | - | |
Car14g00535 | 293 | MobiDBLite | consensus disorder prediction | 128 | 154 | - | - | |
Car14g00535 | 293 | ProSiteProfiles | Zinc-finger ZF-HD dimerization-type profile. | 60 | 111 | IPR006456 | - | |
Car14g00535 | 293 | Pfam | ZF-HD protein dimerisation region | 58 | 112 | IPR006456 | - | |
Car14g00535 | 293 | MobiDBLite | consensus disorder prediction | 30 | 44 | - | - | |
Car14g00535 | 293 | MobiDBLite | consensus disorder prediction | 16 | 52 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Car04g01696 | Car-Chr4:9737682 | Car14g00535 | Car-Chr14:2939620 | 2.21E-24 | dispersed | |
Car14g00535 | Car-Chr14:2939620 | Car18g01061 | Car-Chr18:10824746 | 1.69E-63 | dispersed | |
Car11g00862 | Car-Chr11:5329178 | Car14g00535 | Car-Chr14:2939620 | 1.32E-144 | wgd | |
Car14g00535 | Car-Chr14:2939620 | Car15g00270 | Car-Chr15:1466885 | 9.50E-14 | wgd | |
Car14g00535 | Car-Chr14:2939620 | Car04g02663 | Car-Chr4:20741567 | 2.00E-13 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
4646 | PF04770 | ZF-HD_dimer | 6.30E-29 | No_clan | Car | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Car14g00535 | - | - | csv:101204974 | 445.662 |