Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car14g00544 ATGGAGGCGGCAGCTTTGGTACTGAAGAATGAGGAGAATCTGAGAATATGTTGGACGGGAGGTCAAGCTCAGGCCATAAGACGTGTAAAGAGACGGCGGAGAGAGCCAGCTGCTGCTGCCGCCGCCGCCGCGGATCAAACTAATAAACAACAGAGTGTGAAGCAACAATCCGATCAAGGTCCGACCACCACTATGAAGCGGAGTTCGAGATTTCGGGGGGTCAGCAGACATAGATGGACGGGTCGGTTTGAAGCTCATTTGTGGGATAAACTTTCTTGGAACATGACGCAGAAGAAGAAGGGAAAACAAGAGTATGAGAAAGAGATTGAGACAATGCAAACAATGACAAAGGAGGAGTATTTGGCCTCTTTAAGAAGAAAGAGCAGTGGCTTTTCAAGAGGTGTATCAAAGTATAGAGGAGTTGCAAGGCATCATCATAATGGTAGATGGGAAGCAAGAATAGGGAGAGTTTATGGGAACAAGTACCTGTATCTTGGAACTTACGGCACTCAAGAGGAAGCTGCTCGAGCTTACGACATGGCCGCCATTGAATACCGAGGGATCAATGCAGTCACCAACTTCGACTGGAGCAATTACATGGCCTGGCTGAAGCCTCCTCCAGTGCCACCCGCTGCCCTCAACGACGTCCATACGACGTCGAATCCCGACAAGGAACTCTGTAACTCCAGATCCATCCCAGTAGAAGAAACTTCAATGTTTGGAAACAATCACTACGACATCGATCTCTTCCATTCCCTTCAAAAGCAAGAGCTCCTCGAGAGCTGTAGCACCCCGATCAATGGCTACGCTAAATCATCTTCTCCATCAGCGCTCGATCTCCTTCTTCGGTCATCATTTTTCAAGAAACTTGTTGAGACCAACTCATCTCTCTCTGTGGATGATGCTGATAATGGAGAAGAGACCAAGACTCATGTGCAGCTCAACAGTGTATTTGATGAATTTGGAGACGTTTTCGGTGATAGACTTACAGATGAACAGTTCGTTTGCAGCTCGAACAAAGATCTGCAAGAAAGTGAGCTTCATTCATACTTTAATGGCATGTTTCATCGTTTCAAAGCAGCCTGA 1086 46.96 MEAAALVLKNEENLRICWTGGQAQAIRRVKRRRREPAAAAAAAADQTNKQQSVKQQSDQGPTTTMKRSSRFRGVSRHRWTGRFEAHLWDKLSWNMTQKKKGKQEYEKEIETMQTMTKEEYLASLRRKSSGFSRGVSKYRGVARHHHNGRWEARIGRVYGNKYLYLGTYGTQEEAARAYDMAAIEYRGINAVTNFDWSNYMAWLKPPPVPPAALNDVHTTSNPDKELCNSRSIPVEETSMFGNNHYDIDLFHSLQKQELLESCSTPINGYAKSSSPSALDLLLRSSFFKKLVETNSSLSVDDADNGEETKTHVQLNSVFDEFGDVFGDRLTDEQFVCSSNKDLQESELHSYFNGMFHRFKAA 361
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 2995913 2998538 + Carg09775-RA Car14g00544 160446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car14g00544 361 ProSiteProfiles AP2/ERF domain profile. 137 195 IPR001471 GO:0003700|GO:0006355
Car14g00544 361 MobiDBLite consensus disorder prediction 33 73 - -
Car14g00544 361 MobiDBLite consensus disorder prediction 44 69 - -
Car14g00544 361 Pfam AP2 domain 136 187 IPR001471 GO:0003700|GO:0006355
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car11g00872 Car14g00544 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car14g00544 Car-Chr14:2995913 Car17g00860 Car-Chr17:7254275 1.51E-65 dispersed
Car11g00872 Car-Chr11:5425205 Car14g00544 Car-Chr14:2995913 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
4649 PF00847 AP2 4.30E-13 CL0081 Car TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car14g00544 - - cpep:111791316 660.988