Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car14g00546 ATGATGGCAGGTTGGAGTATTAAGGCTGCCTTGCTGCTGCTTTCAATGGCTGTTCTTATGCCATCTCTCAGGGCTGGCATTGCTGAATATGATGACTTTTTGCTGCAACAGGCTGAAGAGGCCAAACAGGCTGCTCTTAAAGCCTACCACCCTCACCCCATGAATGTCACCGATCATTTTAACCATCATGTTTATTTGGCTTTACAGGGAATTCAGGGAAACAATAGCACTAGGAGGAGCTTGAGGCAATACAAAGGACCGTGCTTGGCGACGAACCCGATCGATCGTTGCTGGCGTTGCGACCGAAATTGGGCCAACAACCGTAAGAAACTTGGCTATTGTGTTCTTGGTTTTGGCCGAAAAACCACCGGGGGATTAAGAGGACGTTTCTATACCGTCACCGATGCTTCGGATGCTGATGTCGTAAACCCTAAACCCGGAACCCTCCGACATGCTGTTGTTCAAAAGCGGCCGTTGTGGATTATTTTTGGACGTAGCATGATCATTAGGCTGTCTAAGGAACTGTTGGTGACTAGCGATAAGACCATTGATGCTCGTGGTGCCAATGTGCATATTGCTTATGGTGCTGGTATTAGCGTTCAATTCGCCCGGAATGTGATCATCCATGGTCTTCACATCCACCACATTCTTTCGGCCTCTGGCGGTATGATCCGAGACGCCGCCGACCATGTTGGCCTTCGAACAGTCAGTGATGGCGATGGCATATCCATCTTTGGATCATCCAATGTCTGGCTCGATCATCTCTCCATGTCCAACTGCCAGGACGGCCTCATCGACGCCATCCAAGGCTCCACGGCTATCACCGTCTCAAACTCTCATTTCACTCATCACAACGACGTGATGCTGTTTGGTGCGAGTGATTCATTTGAAGGCGACTCGGTCATGCAAGTGACTGTCGCTTTCAACCATTTTGGTAAGGGATTGGTGCAGAGGATGCCGCGCTGCAGATGGGGCTTCTTCCATGTTGTCAACAACGATTACACTCACTGGCTCATGTATGCCATTGGTGGCAGCCAACATCCCACCATTATCAGTCAAGGGAATCGTTTCATTGCCCCACCTAACCCTGCTGCAAAACAGATCACGAACAGAAACTACGCAACAGAGAGTGTATGGAAGACATGGACATGGAGATCGGAAGGGGATTTGTTGATGAACGGAGCGTATTTTGTTGAGTCTGGGGATCCAAGCAAGCAAAGGCCATACAGCAGGTTCGACATGATAAAGGCTAGGCCTGGCACTTTTGTTAGGAGGCTGACGCGCTTCTCTGGCTCGCTCAACTGTTATGTTGGTCGCCCATGCTAA 1326 49.7 MMAGWSIKAALLLLSMAVLMPSLRAGIAEYDDFLLQQAEEAKQAALKAYHPHPMNVTDHFNHHVYLALQGIQGNNSTRRSLRQYKGPCLATNPIDRCWRCDRNWANNRKKLGYCVLGFGRKTTGGLRGRFYTVTDASDADVVNPKPGTLRHAVVQKRPLWIIFGRSMIIRLSKELLVTSDKTIDARGANVHIAYGAGISVQFARNVIIHGLHIHHILSASGGMIRDAADHVGLRTVSDGDGISIFGSSNVWLDHLSMSNCQDGLIDAIQGSTAITVSNSHFTHHNDVMLFGASDSFEGDSVMQVTVAFNHFGKGLVQRMPRCRWGFFHVVNNDYTHWLMYAIGGSQHPTIISQGNRFIAPPNPAAKQITNRNYATESVWKTWTWRSEGDLLMNGAYFVESGDPSKQRPYSRFDMIKARPGTFVRRLTRFSGSLNCYVGRPC 441
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 2999530 3001287 - Carg09773-RA Car14g00546 160448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car14g00546 441 Pfam Pectate lyase, N terminus 27 81 IPR007524 GO:0030570
Car14g00546 441 Pfam Pectate lyase 177 357 IPR002022 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car11g00874 Car14g00546 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car12g00671 Car-Chr12:4585982 Car14g00546 Car-Chr14:2999530 0 dispersed
Car14g00546 Car-Chr14:2999530 Car17g00103 Car-Chr17:607458 5.55E-166 dispersed
Car11g00874 Car-Chr11:5436999 Car14g00546 Car-Chr14:2999530 0 wgd
Car14g00546 Car-Chr14:2999530 Car18g00116 Car-Chr18:623998 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car14g00546 K01728 - csv:101202789 791.186