Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Car14g00572 | ATGGCCGCCGCTGGAGGAACAGAGGCTTTCCCTGATCTTGGCCGCCACTGCCAGCACTCCGATTGCCACCAACTCGATTTCCTTCCGTTCACCTGCGACGGTTGCCAAAAGGTGTTCTGTTTGGAGCATCGCGGTTTCAAATCCCACGACTGCCCGAAATCTGATCGGAACAGTAGAAAAGTTGTGGTCTGTGAAATCTGCTCCATGTCGATCGAGACCACCGGGAAGGACGGCGGCCACGAGAGCAGGATTTTGGAGAGGCATCACGAATCAGGAGATTGCGATCCAAGGAAGAAGAAAAAGCCCACTTGTTCAGCGAGGCGGTGCCGGGAAATTCTTACGTTTTCCAATACTTGTGTGTGTAAAACCTGCCGTTTGAAGGTGTGTTTGAAGCACCGGTTTCCGGCGGAGCATAATTGTGGACGGGTGGGTACAGGGCGGTGGAATGAGAAGTTTATGGCGGCTTTGGAATTGAGGAACGGTGGCGATTGTGGGAAAAGGGGACGTCCGACGGCGGCTAATGGGTCTTCCCCATCTGTTAAAGCTTGTTGA | 552 | 53.44 | MAAAGGTEAFPDLGRHCQHSDCHQLDFLPFTCDGCQKVFCLEHRGFKSHDCPKSDRNSRKVVVCEICSMSIETTGKDGGHESRILERHHESGDCDPRKKKKPTCSARRCREILTFSNTCVCKTCRLKVCLKHRFPAEHNCGRVGTGRWNEKFMAALELRNGGDCGKRGRPTAANGSSPSVKAC | 183 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 14 | 3108693 | 3109877 | - | Carg09747-RA | Car14g00572 | 160474 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Car14g00572 | 183 | Pfam | AN1-like Zinc finger | 104 | 141 | IPR000058 | GO:0008270 | |
| Car14g00572 | 183 | Pfam | AN1-like Zinc finger | 17 | 54 | IPR000058 | GO:0008270 | |
| Car14g00572 | 183 | ProSiteProfiles | Zinc finger AN1-type profile. | 11 | 59 | IPR000058 | GO:0008270 | |
| Car14g00572 | 183 | ProSiteProfiles | Zinc finger AN1-type profile. | 98 | 148 | IPR000058 | GO:0008270 |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Car03g00064 | Car-Chr3:802954 | Car14g00572 | Car-Chr14:3108693 | 7.00E-36 | dispersed | |
| Car14g00572 | Car-Chr14:3108693 | Car07g01268 | Car-Chr7:7883740 | 3.16E-37 | transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Car14g00572 | - | - | cpep:111790333 | 394.815 |