Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car14g00601 ATGGCTTCCATTTTCATCCATGGAGTTTCCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCCTGTTCTTCTCTGTTTCTCTCTCAGATCCCCGAATCTCCGAAGCCGGAAGCATCTGCGGAACCTTCAAGCCTCCGCCCAAATCCCGATTCATCCCAACCTTCATCGAAGAAATGGAAGCCATATCCGAGCTTCTCACAACTCGCAATTGGACAACTCACTTCGTCAATTCTACTCCCCCGATGTTTGCCTTATCGCAATGCTTCAACGATCTCTCTCACAACGATTGCCTTCTCTGTTACGCCGCCAGCCGTACCGCCCTTCCTCGTTGCCTTCCCGCCGTCTCCGCCCGGATCTTCCTCGATGGATGCTTCCTCCGGTACGACAATTACAGCTTCTACAAAGAGTCCACTGATTCCCTTAGGGATTCTGTGAATTGTACCTCGGAATTGGGGGAAATCGATGAATCTGATAAGTTAGGGTTTGGAGAGAATGTTAGGGTTGTTGTTGAGAATGTGACGAGGACGGCCATGGCGAATGGCGGATTTGGGATTGGTGAAGTTAATGGACTGTTTGGTTTGGCGCAGTGTTGGGGGAGTGTTGAGCCTGAGGGTTGTAGGGCTTGCTTGGAGAAGGCGAGGAGGAGTATTAGAAGCTGCTTGCCAAGTAGGGAAGGGAGGGCTTTGAATGCTGGGTGCTATTTGAGGTATTCAACTGTGAAGTTCTTCAATGATAAGGCTGAAGAACAGGATCATGATGATCAAAACGGATTTTCTGGAAGAAGAGCTGTAGCTGCCATTGTTTTAGCTTCAGTTGCCTCCTTGATCATCGCCATTTCAGCTGCTTTTGCATGCTATACAAGAATATCAAACTTAAAGAAAGAGAAGAAAAAACAATCCCTTATTCCAATTTCCTTTAGGGATTCCGATGTGAATTTCAAGTATGAAACGCTTGAAAAGGCCACTAATTACTTCAGCCCATCAAGTAAGATAGGCCAAGGTGGAGCTGGTTCTGTATATAAAGGAACTCTTCCAAATCGGCAGATTGTTGCTGTGAAGAGGTTGGTTTTCCATACCAGGCAATGGGTTGATGAGTTCTTCAATGAAGTGAATTTGATCCGTGGAATCCAACACAAAAACCTTGTTACCCTTTTAGGCTGCAGCATTGAAGGACCTGAAAGTCTGCTGGTCTACGAGTATGTTCCGAATCGGAGCCTCGATCAGTTCATTTTCGATAAGAACAAGGTTCAGATTCTGAATTGGAAGCAGCGTTTCAATATTATCCTGGGAACAGCTGAGGGGCTTGCACATCTTCATGAAGGTTGTAAGATGAGAATAATCCATAGAGACATAAAGAGTAGTAATGTTCTTCTGGATGAAAATTTCAATCCAAAGATTGCGGATTTCGGCCTCGCTCGGCATTTCGCAGCCGATCAGACTCATCTTAGCACCGGAATTGCCGGGACACTAGGTTATATGGCTCCTGAATATCTCGTTCGAGGACAGCTTACCGAAAAGGCAGACGTTTATAGCTTTGGAGTGCTGATACTCGAGATCGTCTGCGGTAGACGAAACAGTTCCTTCACAGAGAACTCTACCCCACTCCTCCAAACAGTTTGGGATCTGTACAAATCAGGGAGATTAAGTGAAGCCATTGACTCATGCTTGAACAAGGATTACCCAGCAAAGGAAGCCATGGATGTTCTGCAAATAGGGCTGCTATGCACACAAGCTCTAGCTTCTTTAAGACCGTCAATGGCGACGGTGGTGAAACTGGTAAGCAGTGAAGGAGAGAGGAAGGTTTCCATCCCAGAACAACCTCCATTTTTGAATCCCTGTGGAGCCTCCAGAAGATCTTGTAGAGTCAGCAGCTTGGTTTCCAAACTTGAAGTTTCTTCTGGCACATCAACAGATTCAGGTTCTTCTTCTTCTTCTTCTAACTTGCCTTCATGA 1953 45.78 MASIFIHGVSFFFFFFFFFFFLFFSVSLSDPRISEAGSICGTFKPPPKSRFIPTFIEEMEAISELLTTRNWTTHFVNSTPPMFALSQCFNDLSHNDCLLCYAASRTALPRCLPAVSARIFLDGCFLRYDNYSFYKESTDSLRDSVNCTSELGEIDESDKLGFGENVRVVVENVTRTAMANGGFGIGEVNGLFGLAQCWGSVEPEGCRACLEKARRSIRSCLPSREGRALNAGCYLRYSTVKFFNDKAEEQDHDDQNGFSGRRAVAAIVLASVASLIIAISAAFACYTRISNLKKEKKKQSLIPISFRDSDVNFKYETLEKATNYFSPSSKIGQGGAGSVYKGTLPNRQIVAVKRLVFHTRQWVDEFFNEVNLIRGIQHKNLVTLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKVQILNWKQRFNIILGTAEGLAHLHEGCKMRIIHRDIKSSNVLLDENFNPKIADFGLARHFAADQTHLSTGIAGTLGYMAPEYLVRGQLTEKADVYSFGVLILEIVCGRRNSSFTENSTPLLQTVWDLYKSGRLSEAIDSCLNKDYPAKEAMDVLQIGLLCTQALASLRPSMATVVKLVSSEGERKVSIPEQPPFLNPCGASRRSCRVSSLVSKLEVSSGTSTDSGSSSSSSNLPS 650
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 3346716 3349761 + Carg09718-RA Car14g00601 160503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car14g00601 650 ProSitePatterns Serine/Threonine protein kinases active-site signature. 446 458 IPR008271 GO:0004672|GO:0006468
Car14g00601 650 ProSiteProfiles Gnk2-homologous domain profile. 142 242 IPR002902 -
Car14g00601 650 MobiDBLite consensus disorder prediction 629 650 - -
Car14g00601 650 Pfam Protein kinase domain 328 564 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car14g00601 650 Pfam Salt stress response/antifungal 74 131 IPR002902 -
Car14g00601 650 Pfam Salt stress response/antifungal 157 239 IPR002902 -
Car14g00601 650 ProSiteProfiles Protein kinase domain profile. 325 586 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car14g00601 650 ProSiteProfiles Gnk2-homologous domain profile. 33 133 IPR002902 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car07g00915 Car14g00601 CCT
Car07g00915 Car14g00601 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car05g00027 Car-Chr5:149238 Car14g00601 Car-Chr14:3346716 5.44E-06 dispersed
Car12g00022 Car-Chr12:119249 Car14g00601 Car-Chr14:3346716 7.13E-140 dispersed
Car14g00601 Car-Chr14:3346716 Car16g00582 Car-Chr16:3649898 5.91E-87 dispersed
Car14g00601 Car-Chr14:3346716 Car18g00715 Car-Chr18:8355334 0 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
89319 PF00069 Pkinase 5.40E-46 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car14g00601 - - csv:101218775 1051.58