Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car14g00608 ATGGCGGGTCTCGAGGAACTCAAGAGAAAACTTACTCCCTTGTTTGATGCTGAAAAGGGGCTTTCTATGGATTCCTCTGTGGACCCTTCTGATTCATATACGTTTTCAGACAATGGGACTGTTAATTTGCTGAGCCGATCCTATGGGGTTTACAATTTTAATGAGCTAGGGTTACAAAAATGTACGTCGTGGCTTGCTGATGATTCGGGGAGTAGCGAAAGGACATATCGATGTGCTTCCCGTGAAATGAGGATATTTGGAGCCATTGGTAGTGGGGCTAGCAGTGTTGTTCAGAGAGCTATCCACATTCCTGCTCATCGAATCATGGCATTGAAGAAGATTAATATCTTTGAAAAGGAGAAAAGGCAGCAGCTTCTTACCGAGATAAGGACACTGTGTGAAGCGCCCTGTTCTGAGGGCCTTGTGGAGTTTCATGGAGCATTTTATACCCCTGATTCTGGGCAAATTAGCATAGCTTTGGAGTACATGGATGGAGGGTCGTTGGCAGATGTCCTGCGTTTGAAAAAATGTATACCCGAGCCTGTCCTTTCGTCTATGTTTCAGAAACTTCTTCAAGGTCTAAGTTACCTGCATGGAATGAGACATTTGGTTCACAGAGATATAAAGCCAGCCAATTTACTTGTAAATCTTAAGGGTGAAGCGAAAATTACTGATTTTGGCATAAGTGCTGGCTTGGAGAATTCAATGGCAATGTGTGCAACTTTCGTCGGAACTGTCACGTACATGTCACCAGAGCGAATTCGAAACGAGAGTTATTCTTATCCAGCTGACATTTGGAGCCTTGGGCTTGCACTCTTTGAGTGTGGTACTGGTGAATTTCCATATTCAGCTACTGAAGGTCTAGTGAACCTTATGTTGCAGATTTTGGATGACCCGTCTCCATCGCCATCAAAACATAAGTTTTCTCCGGAGTTTTGCTCGTTTGTTGATGCTTGCTTGCAGAAAGACGCAGATGCTAGGCCAACAGCGGAGCAGCTGCTTTCACACCCATTTATCAAAAAATATGAGGATGAACAAGTAGACTTGGCAGCTTTTGTACAGAATGTGTTTGATCCAATACAGAGGATGAAGGACTTGGCCGATATGTTGACCATTCATTATTACTTGCTCTTTGATGGACCTGATGAATTATGGCACCATACAAAGGCTTTATACCATGAAAGCTCAACTTTAAGTTTCTCAGGGAAGCAATTTTCTGGTGCAAATGATATCTTTGCCAAACTATCAGACATTCGAAGTACATTAGGGGGAGACTGGCCTCTTGAAAAACTAGTTCATGTCGTCGAGAAACTCCAATGCCGAGCTCACGGTCGGGATGGAGTTGCCGTAAGGGTGTCTGGATCCTTCATCGTTGGGAACCAGTTTCTCATATGCGGAGACGGTGTACAAGTAGAGGGACTGCCAAATTTTAAAGATCTCTCCATCGACATGGCAAGTAAGAAAATGGGATCCTTCCGTGAGCAGTTCATCATCGAACCGAGTGACCTCATCGGTCGATACTTCATAGCCAAACAAGAGCTTTATATAATTCAATAG 1557 43.8 MAGLEELKRKLTPLFDAEKGLSMDSSVDPSDSYTFSDNGTVNLLSRSYGVYNFNELGLQKCTSWLADDSGSSERTYRCASREMRIFGAIGSGASSVVQRAIHIPAHRIMALKKINIFEKEKRQQLLTEIRTLCEAPCSEGLVEFHGAFYTPDSGQISIALEYMDGGSLADVLRLKKCIPEPVLSSMFQKLLQGLSYLHGMRHLVHRDIKPANLLVNLKGEAKITDFGISAGLENSMAMCATFVGTVTYMSPERIRNESYSYPADIWSLGLALFECGTGEFPYSATEGLVNLMLQILDDPSPSPSKHKFSPEFCSFVDACLQKDADARPTAEQLLSHPFIKKYEDEQVDLAAFVQNVFDPIQRMKDLADMLTIHYYLLFDGPDELWHHTKALYHESSTLSFSGKQFSGANDIFAKLSDIRSTLGGDWPLEKLVHVVEKLQCRAHGRDGVAVRVSGSFIVGNQFLICGDGVQVEGLPNFKDLSIDMASKKMGSFREQFIIEPSDLIGRYFIAKQELYIIQ 518
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 3382833 3386644 + Carg09711-RA Car14g00608 160510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car14g00608 518 ProSiteProfiles Nuclear transport factor 2 domain profile. 366 516 IPR018222 -
Car14g00608 518 ProSiteProfiles Protein kinase domain profile. 83 339 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car14g00608 518 ProSitePatterns Serine/Threonine protein kinases active-site signature. 203 215 IPR008271 GO:0004672|GO:0006468
Car14g00608 518 ProSitePatterns Protein kinases ATP-binding region signature. 89 112 IPR017441 GO:0005524
Car14g00608 518 Pfam Protein kinase domain 87 339 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car12g01289 Car-Chr12:11950390 Car14g00608 Car-Chr14:3382833 5.02E-75 dispersed
Car14g00608 Car-Chr14:3382833 Car18g00075 Car-Chr18:394422 3.55E-45 dispersed
Car14g00608 Car-Chr14:3382833 Car05g01287 Car-Chr5:11892559 7.37E-80 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
89320 PF00069 Pkinase 8.00E-60 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car14g00608 K20607 - csv:101217978 996.882