Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car14g00662 ATGGATTGGGGTTGGGGAACTCTTTCTGGAAAACCCACTTTCCGGGAAAAGAATCACACCCCCCCACCGCCCACAAGTTTCTCTGACTCGATTGGTTCTTCCAATAATAATGAAGAACCCATTCTCGAGGGTTCGAGCCAGGAAAGTTCTTCCTCTAATGGATCCTCCAAAAGGACTCGAATCCTCCAAGGGACTCAAAATCAGTCCTGTTTGGTCGATGGTTGTGACTCTGACCTGAAGAATTGCAAGGAGTATCATCGACGCCATAGGGTCTGCGATTCGCACTCCAAAACCCCTGTTGTGATGGTGAGGGGCGAGGAAAAACGATTCTGTCAACAGTGCAGCAGGTTCCATCCGCTTGGTGAGTTCGATGAGGTGAAGCGAAGCTGTAGAAAGCGGCTTGATGGGCACAATCGCCGCAGGAGGAAGCCTCAACCCGAATCCCTGTTTATGAGTTCAAGAGATTTCCTGTCAAACTGCAAAGGGCCAATTGTGCTGCAGTTCAGTAATCAACAGATTCATGTGCCTGATGAACATGGTAGGAGTTTATGGTCCATGAGGCCTGAAGAAACCTCCATGGTTCCACCAAATTCCTCTTCTTACTTCAGCTATGGAGGAGGAGGAGGAGACAACGAAGAGTTGCCCTTTTTCCTCCACAAAAATGGGTCAAGGCAAGGTAAGCAAATGGTGTCTTCTCGGTTATGTTTCAATCAGCAACTTCCTGATGCAATCTCTCAGGGAAGTGAGGTGGGCAGCCAGAAACAAGCGGTGCCTACCAATACTTCGCCCGTGGATTCAGGTTGTGCTCTCTATCTTCTGTCATCGCACCCAGATGCTGGGTTGAGCTCTTTAGTTCAGTCTCATCTGAGTCTTCCAGTCCATACTCCAGAGACTGAGCTGCATTTCAGTAGTTTAAGTGACTTCTCTGCCTCCTTTGGCTCCAAGGACAAGCCTGTTTGTGAAACCAATCTTGATAATGGGTTGGAGCTTGAAATGGAGGCATCTGATGGCTTGTTCCAAAGTGAGGCTCCACATAAGTTTCCCATTTCTTGGGAGTAG 1059 48.44 MDWGWGTLSGKPTFREKNHTPPPPTSFSDSIGSSNNNEEPILEGSSQESSSSNGSSKRTRILQGTQNQSCLVDGCDSDLKNCKEYHRRHRVCDSHSKTPVVMVRGEEKRFCQQCSRFHPLGEFDEVKRSCRKRLDGHNRRRRKPQPESLFMSSRDFLSNCKGPIVLQFSNQQIHVPDEHGRSLWSMRPEETSMVPPNSSSYFSYGGGGGDNEELPFFLHKNGSRQGKQMVSSRLCFNQQLPDAISQGSEVGSQKQAVPTNTSPVDSGCALYLLSSHPDAGLSSLVQSHLSLPVHTPETELHFSSLSDFSASFGSKDKPVCETNLDNGLELEMEASDGLFQSEAPHKFPISWE 352
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 3658014 3659284 - Carg09656-RA Car14g00662 160564
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car14g00662 352 ProSiteProfiles Zinc finger SBP-type profile. 67 144 IPR004333 GO:0003677
Car14g00662 352 Pfam SBP domain 70 143 IPR004333 GO:0003677
Car14g00662 352 MobiDBLite consensus disorder prediction 1 61 - -
Car14g00662 352 MobiDBLite consensus disorder prediction 20 61 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car11g01303 Car14g00662 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car14g00662 Car-Chr14:3658014 Car17g01323 Car-Chr17:9901582 3.39E-47 dispersed
Car10g00040 Car-Chr10:176209 Car14g00662 Car-Chr14:3658014 2.13E-37 wgd
Car11g01303 Car-Chr11:10804091 Car14g00662 Car-Chr14:3658014 4.08E-162 wgd
Car11g00025 Car-Chr11:111811 Car14g00662 Car-Chr14:3658014 7.81E-40 wgd
Car14g00662 Car-Chr14:3658014 Car18g00237 Car-Chr18:1353627 8.16E-42 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
4657 PF03110 SBP 9.00E-31 No_clan Car TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car14g00662 - - cmos:111442201 699.123