Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car14g00663 ATGGAGAATTACCAGATGTTCTTCCCTTGCTCCAACGGCGGCGGACTGTCGGCTTATAGTCAACCCGACATCTCATCCGGCACCGCCTCTGACATGTTCCGGAATTTCCACGGCGGCGATCCGCAAGCAAGTGGGGTTTTGGGGCTTAAGACTGAGGTGGTTACGGCGGCGGTGGAAGCCGATGGGAACTGTGGCGGCAGCGGAAATAAGAAAGGGGAGAAGAAGGTGAGGAAACCCAGATATGCTTTTCAGACGAGGAGTCAAGTTGACATTCTTGACGATGGATATCGTTGGAGAAAATATGGTCAAAAAGCAGTAAAAAACAACAAGTTTCCTAGGAGCTATTATCGGTGCACGCATCAAGGGTGTAATGTGAAGAAGCAAGTGCAAAGACTAACGAGAGATGAAGGGGTGGTGGTAACGACGTATGAAGGCATGCATACACATTCCATTGATAAACCAACCGACAACTTTGAACAAATCTTGAGTAGAATGCAGATTTACAGTACTCCTTTTTGA 519 47.78 MENYQMFFPCSNGGGLSAYSQPDISSGTASDMFRNFHGGDPQASGVLGLKTEVVTAAVEADGNCGGSGNKKGEKKVRKPRYAFQTRSQVDILDDGYRWRKYGQKAVKNNKFPRSYYRCTHQGCNVKKQVQRLTRDEGVVVTTYEGMHTHSIDKPTDNFEQILSRMQIYSTPF 172
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 3662835 3664225 - Carg09655-RA Car14g00663 160565
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car14g00663 172 PANTHER WRKY TRANSCRIPTION FACTOR 75-RELATED 1 167 - -
Car14g00663 172 ProSiteProfiles WRKY domain profile. 87 152 IPR003657 GO:0003700|GO:0006355|GO:0043565
Car14g00663 172 Pfam WRKY DNA -binding domain 93 149 IPR003657 GO:0003700|GO:0006355|GO:0043565
Car14g00663 172 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 1 167 IPR044810 GO:0003700
Car14g00663 172 SMART WRKY_cls 92 151 IPR003657 GO:0003700|GO:0006355|GO:0043565
Car14g00663 172 Gene3D WRKY domain 70 152 IPR036576 GO:0003700|GO:0006355|GO:0043565
Car14g00663 172 SUPERFAMILY WRKY DNA-binding domain 84 151 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car11g01302 Car14g00663 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car06g01414 Car-Chr6:10118646 Car14g00663 Car-Chr14:3662835 9.51E-59 dispersed
Car14g00663 Car-Chr14:3662835 Car14g01287 Car-Chr14:10973869 6.13E-58 dispersed
Car04g00667 Car-Chr4:3885633 Car14g00663 Car-Chr14:3662835 6.76E-39 transposed
Car11g01302 Car-Chr11:10795648 Car14g00663 Car-Chr14:3662835 4.40E-98 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
4658 PF03106 WRKY 3.40E-26 CL0274 Car TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car14g00663 - - csv:101219349 285.034