Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car14g00666 ATGGATCCTAAGACCTCATCAGCAACAAAGCAGCCCCAAGAAGTGGTACCCAACTTTTTGAAGCTCCCACAAGAACAGCAACAAGAACAACGACAAGAACAAGAACAAGAACAACGACAATCAATCATGGGTGAAAACAAACCAGCTGAAATCAAGGATTTCCAAATAGCAGTGGCAGAGAAAGAAGAGGGCAAAAAACAGTTAGCACCGAAAAGAAGCTCCAACAAAGACCGTCATACCAAAGTGGAAGGCAGAGGGCGAAGAATCCGGATGCCAGCTCTATGTGCGGCTAGGATTTTTCAATTAACCAGAGAATTGGGTCATAAATCTGACGGCGAGACCATTCAGTGGCTGCTACAGCAGGCGGAGCCGTCGATAATCGCCGTTACTGGCACTGGAACAATCCCAGCTTCTGCTCTTGCAGCGGCGGCGGGTTCCGTTTCGCAACAGGGGGCTTCTCTTTCCGCCGGATTGCACCAAAAATTGGAGGAATTTGGTGGTGGGGGGTCCAGTAGGGCCAATTGGGGCAATTTGGGGCGACCCCATTTGGCCGCCACAGCGACAACAGGGCTTTGGCCCTCATCTGTCAGTGGCTTTGGGTATCAGTCTTCAACAGCAGCAGCTGCTGCTGCTGCTGCTCAATCAGCCACTAATTTAGCTAATGAAACTTCAAATTACTTTCACAAACTTGGGTTCCCTCCCTTTGACTTAACCTCCACCAACATGGGTCCTATGAGTTTCACCTCCATTTTAGGTGGAAACGCCCAACAATTACCTGGTTTGGAGCTTGGATTGTCTCAAGATGGTCATATTGGGGTCATAAATCCTCAAACACTGAACCAGATTTACCAACAGATGGGTCAAGCTAGAGTTCATCAGCATCATCATCAACACCAGCAGCAGCAGCAACAACAACAACAACAACCTCCTGCCAAGGATGATTCTCAAGATTCAGGCTAG 960 48.54 MDPKTSSATKQPQEVVPNFLKLPQEQQQEQRQEQEQEQRQSIMGENKPAEIKDFQIAVAEKEEGKKQLAPKRSSNKDRHTKVEGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQQAEPSIIAVTGTGTIPASALAAAAGSVSQQGASLSAGLHQKLEEFGGGGSSRANWGNLGRPHLAATATTGLWPSSVSGFGYQSSTAAAAAAAAQSATNLANETSNYFHKLGFPPFDLTSTNMGPMSFTSILGGNAQQLPGLELGLSQDGHIGVINPQTLNQIYQQMGQARVHQHHHQHQQQQQQQQQQPPAKDDSQDSG 319
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 3690759 3691718 + Carg09652-RA Car14g00666 160568
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car14g00666 319 MobiDBLite consensus disorder prediction 54 85 - -
Car14g00666 319 MobiDBLite consensus disorder prediction 1 85 - -
Car14g00666 319 MobiDBLite consensus disorder prediction 1 27 - -
Car14g00666 319 ProSiteProfiles TCP domain profile. 75 129 IPR017887 -
Car14g00666 319 MobiDBLite consensus disorder prediction 286 319 - -
Car14g00666 319 Pfam TCP family transcription factor 74 263 IPR017887 -
Car14g00666 319 MobiDBLite consensus disorder prediction 298 319 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car12g00219 Car-Chr12:1440937 Car14g00666 Car-Chr14:3690759 1.26E-72 dispersed
Car14g00666 Car-Chr14:3690759 Car17g01312 Car-Chr17:9868075 2.93E-69 dispersed
Car11g01298 Car-Chr11:10753075 Car14g00666 Car-Chr14:3690759 1.65E-148 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
4659 PF03634 TCP 1.40E-30 No_clan Car TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car14g00666 - - cpep:111791513 548.125