Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car14g00695 ATGCTACCGAAATCCACCGGAATCATTTGGCTTGACGGCGACCATCACGACGGCGCTTCTTGGAACAGAACCAACAACCACAACAACGATGACATCGCTGTTGCTGGCTCCGCTTCCTCCTTCAAATCCATGCTCCAATCCGACTGGTACATGAACTCTACTACTCCTCTGAATCCTTCGAACCAAGATTTTCATTCCCTCTCTTCACACCCCGATGTTCGAGACCTTCCTTTCAACTCCAATCCGCCGGATAACTTGCTCTTACGCCCCATAGATTCTTCCTCTGCCTGTTCTGCATCACAGGCTTTTGCTCTTGATCCTTCCCATTCCCAATCCATGTTGCCTCCTCAGAAATCCTGTTTCCCTTCTCTTTATAACGTTGGTTGTAGCAGTAATTTTGAAAACGGCTTCGATTTGGGCGGTGAGAATGGCCTGCTTGGTTCTTACCAGGGGAACCAAGTTTCGAATTCCTCAGGTATGATGGGATTCAACGGCATTTCGTCTCTTCCTCAAATCGGTAATCAGGAACTAAGCTTAAACAACGCGGAATTTCCGGTCGCTGATAACCCTCCGGCATTCGGCGCTGGATTTAATCCGACGGATGCCTTCGAGAGCTTCGATGGTTGCGGGAATGCTCTGTTTCAGAATAGGTCAAAGGCTTTGAGACCTCCTGAATCGTTCCCTCAGGTCGGCGGCACACAGCCGACGCTGTTCCAGAAGCGGGCGGCGCATCGAGTTGGCTCTTCCGGAGTTGATAAACTAGAGAATTTGGAGGTTTCGGGTTCTAAATTTGGAGACGGCTCAATGTGGATGCCGAATATGGAGAGGCTGATGAAGAACAGCGACGAGGACATTGAGGACGACAGCCTGGATATTTCTCGCTTGAATTACGATTCCGATGAAGCCAATGAGTATAATAAGCTAGAGGACAATGTTAATGCTAAAAACTCCGGAAGCAATTCCAATGCCAACACCACTGTAACTGACGGAAACCAGAAGGGGAAGAGGAAGGGGATGCCGGCGAAAAATCTCATGGCGGAGCGACGGCGAAGAAAGAAGCTGAATGATAGACTCTACATGCTTAGGTCCGTCGTACCCAAAATCAGCAAGATGGATAGAGCTTCAATCCTTGGAGATGCCATTGATTACCTGAAGGAGCTTCTTCAAAAGATAAATGAACTCCATAATGAACTTGAGTCGACTCCTCCTCCTCCTCCTCCTCCTGGTTCTTCGTTGCAGCCTCCTGCAAGCTTTCACCCTTTGACGCCGACGCTGCCGATACCGACGCTGCCGAATCTTCCCTGTCGTGTCAAAGAAGAGCTGTGTCCAAGCTCCATGTCAAGCCCCAAAGCTCAGCCTGCCAGGGTCGAAGTCCGAGCCAGAGAAGGCAGAGCTGTCAATATTCACATGTTTTGTTCTCGCAAGCCAGGTCTCTTGCTATCCACCATGAAGGCTCTGGACAACCTTGGCTTGGACATCCAACAAGCTGTGATAAGCTGTTTTAATGGATTTGCTTTAGACGTGTTTCGCGCCGAGCAATCCAAGGAAGGCGAGGAGGTCTCACCGGAGCAAATTAAAGCAGTGCTGTTGGATTCAGCTGGTTTACATGGTGTTGTTTAA 1620 49.38 MLPKSTGIIWLDGDHHDGASWNRTNNHNNDDIAVAGSASSFKSMLQSDWYMNSTTPLNPSNQDFHSLSSHPDVRDLPFNSNPPDNLLLRPIDSSSACSASQAFALDPSHSQSMLPPQKSCFPSLYNVGCSSNFENGFDLGGENGLLGSYQGNQVSNSSGMMGFNGISSLPQIGNQELSLNNAEFPVADNPPAFGAGFNPTDAFESFDGCGNALFQNRSKALRPPESFPQVGGTQPTLFQKRAAHRVGSSGVDKLENLEVSGSKFGDGSMWMPNMERLMKNSDEDIEDDSLDISRLNYDSDEANEYNKLEDNVNAKNSGSNSNANTTVTDGNQKGKRKGMPAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQKINELHNELESTPPPPPPPGSSLQPPASFHPLTPTLPIPTLPNLPCRVKEELCPSSMSSPKAQPARVEVRAREGRAVNIHMFCSRKPGLLLSTMKALDNLGLDIQQAVISCFNGFALDVFRAEQSKEGEEVSPEQIKAVLLDSAGLHGVV 539
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 3824074 3827059 + Carg09621-RA Car14g00695 160597
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car14g00695 539 MobiDBLite consensus disorder prediction 60 81 - -
Car14g00695 539 MobiDBLite consensus disorder prediction 399 418 - -
Car14g00695 539 MobiDBLite consensus disorder prediction 309 340 - -
Car14g00695 539 Coils Coil 377 401 - -
Car14g00695 539 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 338 387 IPR011598 GO:0046983
Car14g00695 539 ProSiteProfiles ACT domain profile. 467 539 IPR002912 -
Car14g00695 539 MobiDBLite consensus disorder prediction 397 418 - -
Car14g00695 539 MobiDBLite consensus disorder prediction 309 332 - -
Car14g00695 539 Pfam Helix-loop-helix DNA-binding domain 345 387 IPR011598 GO:0046983
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car11g01271 Car14g00695 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car12g00162 Car-Chr12:929971 Car14g00695 Car-Chr14:3824074 9.37E-42 dispersed
Car13g00673 Car-Chr13:8187877 Car14g00695 Car-Chr14:3824074 2.28E-157 dispersed
Car14g00695 Car-Chr14:3824074 Car18g00249 Car-Chr18:1454043 1.39E-151 dispersed
Car16g00629 Car-Chr16:4013608 Car14g00695 Car-Chr14:3824074 4.30E-26 dispersed
Car19g00575 Car-Chr19:7205032 Car14g00695 Car-Chr14:3824074 2.55E-25 dispersed
Car17g00067 Car-Chr17:383812 Car14g00695 Car-Chr14:3824074 6.69E-13 transposed
Car11g01271 Car-Chr11:10604990 Car14g00695 Car-Chr14:3824074 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
4662 PF00010 HLH 2.20E-09 No_clan Car TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car14g00695 - - bhj:120082707 796.578