Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car14g00872 ATGGAGGCTGGATATGGAGGCGAAGCTTGTCAATTGTATGGTATGAGTAGCATGGACTTGAGGGCTGCTGTTGGTAAGCGGAGTTTGGAATGGGATTTGAATGATTGGAAATGGGATGGAGATCTCTTTATTGCTACGCCATTAAACACTGTGGAATCTGATCATTTGAACAGGCAGCTATTTCCAATTGTCTCTGGGATTCCCTTGACAACAGGGGGCTCTTCGAACAGTTCTTCGTCTTGCTCTGATGAAGCTAATATGGGGATCGAGAAAGGGAAAAGGGAAGTGGAGAAACGGAGGAGGATTAGTGGTATAGAAGATGAGAATCTTAATGATGAAGCGCGTAGTTTGAGTTTGAAGATTGGTGGAAATGTTTCTCAGACTGTTGAGAGAGATGCTGGGAGTTGGGAAGGGAGTAGTGGGAAGAAGAGTAAGTTGGGTGGGGGAGCTTCAAATCGTGCTGTTTGTCAAGTAGAAGATTGTGGAGCTGATCTGAGCAATGCAAAAGAGTATCATAGACGACATAAAGTTTGTGAAACGCATTCTAAGGCGAGTAATGCGCTTGTTGCTAATGTTATGCAGCGATTCTGTCAACAATGTAGCAGGTTTCATGTTCTTCAAGAGTTTGATGAAGGGAAAAGAAGTTGCCGCAGGCGTTTGGCTGGCCACAATAAGCGCAGAAGAAAAATTAATCCGGATACCGTTGTGAATGGAAACTCTCCACCTGATGAGCAGACTAGTAGTTATTTATTGTTGACTCTATTGCGAATACTTGCAAACTTACACTCCAATGGATCAAATCAGACCACAGATCAGGATCTTCTTTCTCATCTTATACGAACCCTTGCCTGCCAATCTAGTGAACATGGGGGAAAGAACCTAACTGGGATTCTGCATGAACCACAGAAATTGCTGAACAATGGGGCATTGATTGGTAAATCAGATCTAGTTTCTACTTTTCTCTCAAACGGTCCACCGGTACCGTTGAGGTCGTCGAAACAACACGACACGATACCTATATCTGAGGCACCAGTACAAGCCATTGGTAGGGGTGGAGATACACCAGCTGTATCTTGTATTAAACCAAGCACTTCAAACAGCCCTCCTGCATATTCAGAAATCAGGGACAGTCAAGTTGGGCAATGCAAAATGATGAACTTTGATCTAAATGATGCTTATGTTGACTCAGACGATGGCATGGAAGACATTGAGAGACAAGCACTCCCAGTGCACATGGGAACAAGTTCTCTTGAATGTCCTTCTTGGGTGCAACAAGACTCTCATCAGTCAAGCCCCCCTCAAACTAGTGGAAATTCAGATTCAGCATCTGCTCAGTCACCTTCTAGCTCTGCTGGAGAAGCTCAGAGCCGCACAGATCGCATCATTTTGAAACTATTTGGGAAAGCACCAAATGATTTTCCTCACGTTTTGCGAGCTCAGGTTCTAGATTGGTTATCACACAGTCCTACAGAGATTGAGAGCTATATCAGACCTGGTTGTGTTGTTCTAACCGTATACACACGACAGACCGAGGCTGCTTGGGACGATCTTTGTCATGACCTCAGTACCAGTTTCAATAGCCTTCTCGATGTTTCGGACGACGCTTTCTGGAGAACTGGATGGGTTTACGTTCGGGTTCAGCATCAAATAGCTTTCGTTTATCAAGGTCGGGTTGTGGTTGACACATCCTTGCCTCTTAGAAACAAGAATTACTGTAGAATAACAAGTGTGAACCCAGTGGCTGTTTCTACATCTAAGAAGGCTATATTTTCAGTTAAAGGAAGAAACTTGACACAACCTACAACTAGGTTACTCTGTGCAATTGAAGGGAAATATCTGACTCAGGAAGCTTCTGATGAGCCAACCGAACGTGACGATAACTCGAACGCGCAAGATGACAGTCGATGTATTACCTTTTCCTGCTCTATTCCTGTCGTCTATGGAAGGGGATTCATTGAGGTTGAAGATGATGGATTTAGCAGCAGCTTCTTTCCTTTTATAGTTGCAGAGGAGGATGTTTGTTCTGAGATTTGCACACTTCAGAGTGCATTAGAATTGACCGAAACATGTTCGAATTCTGGGGAAACGGAAGAACCGGAAGGAAGGAGTAATGCAATGGAGTTCATTCATGAAATTGGTTGGCTGTTTCATAGGAATCAATTGAAGTCTAGATTAGGTGACTTGGATCCTAATGAAAATCTCTTTTCACTGCCACGGTTCAAGTGGCTCATGGAGTTCGCCATGGACCATGATTGGTGTGCTGTGGTTAAAAAGCTGTTGGATGTTCTTCTTGATGGGACCGTGGATGCTGGAGATCACTCATCCTTGAATCTTGCATTGATGGATATGAGTCTACTTCACCGAGCAGTGAGAAAAAACAGTAGATCACTGGTGGAGCTCCTTTTGGTATATCCCTCAAAAGTGAAGGATACATCAACTGCTGATAGCTTCCTGTTTAGACCGAATGTCGTAGGCCTGGCTGGTTTGACCCCTCTTCACATTGCAGCTGGTAAAGACGACTCCGAGGACGTTCTCGATGCATTAACTAACGACCCCGGAATGGTGGGAGTTGAGGCTTGGAAGAGCGCTCGAGACAGCACGGGGTCAACACCGGAGGATTACGCGCGTTTACGTGGGCATTACTCGTATATTCGACTTGTGCAGAGGAAAATAAACAAGAGATCTGCAGCAGCTGAGCATGTAGTGGTGGAGATTCCTCCTAGTAGTGTATCAGATGGTAGGTGGAATGAGAAGCAGAACACTGATATGAGCTCATCCAGGTTTGAGATTGGTAGGACAGAAGTAAAACATTGCAGGCAGTGTGTGAGAAAACCGGTGCGTTGTGGAACATCATCGAGCGCGTCTCTGGTGTACAGACCGGCGATGCTTTCGATGGTGGCGATTGCTGCTGTGTGTGTGTGTGTGGCACTCCTATTCAAAAGCTCGCCCGAGGTTCTGTACGTGTTCCGACCGTTCCGATGGGAACTGTTAGATTATGGTACTAGTTAG 3009 45.16 MEAGYGGEACQLYGMSSMDLRAAVGKRSLEWDLNDWKWDGDLFIATPLNTVESDHLNRQLFPIVSGIPLTTGGSSNSSSSCSDEANMGIEKGKREVEKRRRISGIEDENLNDEARSLSLKIGGNVSQTVERDAGSWEGSSGKKSKLGGGASNRAVCQVEDCGADLSNAKEYHRRHKVCETHSKASNALVANVMQRFCQQCSRFHVLQEFDEGKRSCRRRLAGHNKRRRKINPDTVVNGNSPPDEQTSSYLLLTLLRILANLHSNGSNQTTDQDLLSHLIRTLACQSSEHGGKNLTGILHEPQKLLNNGALIGKSDLVSTFLSNGPPVPLRSSKQHDTIPISEAPVQAIGRGGDTPAVSCIKPSTSNSPPAYSEIRDSQVGQCKMMNFDLNDAYVDSDDGMEDIERQALPVHMGTSSLECPSWVQQDSHQSSPPQTSGNSDSASAQSPSSSAGEAQSRTDRIILKLFGKAPNDFPHVLRAQVLDWLSHSPTEIESYIRPGCVVLTVYTRQTEAAWDDLCHDLSTSFNSLLDVSDDAFWRTGWVYVRVQHQIAFVYQGRVVVDTSLPLRNKNYCRITSVNPVAVSTSKKAIFSVKGRNLTQPTTRLLCAIEGKYLTQEASDEPTERDDNSNAQDDSRCITFSCSIPVVYGRGFIEVEDDGFSSSFFPFIVAEEDVCSEICTLQSALELTETCSNSGETEEPEGRSNAMEFIHEIGWLFHRNQLKSRLGDLDPNENLFSLPRFKWLMEFAMDHDWCAVVKKLLDVLLDGTVDAGDHSSLNLALMDMSLLHRAVRKNSRSLVELLLVYPSKVKDTSTADSFLFRPNVVGLAGLTPLHIAAGKDDSEDVLDALTNDPGMVGVEAWKSARDSTGSTPEDYARLRGHYSYIRLVQRKINKRSAAAEHVVVEIPPSSVSDGRWNEKQNTDMSSSRFEIGRTEVKHCRQCVRKPVRCGTSSSASLVYRPAMLSMVAIAAVCVCVALLFKSSPEVLYVFRPFRWELLDYGTS 1002
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 5138923 5145623 - Carg11183-RA Car14g00872 160774
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car14g00872 1002 MobiDBLite consensus disorder prediction 130 150 - -
Car14g00872 1002 MobiDBLite consensus disorder prediction 72 95 - -
Car14g00872 1002 ProSiteProfiles Zinc finger SBP-type profile. 153 230 IPR004333 GO:0003677
Car14g00872 1002 MobiDBLite consensus disorder prediction 420 455 - -
Car14g00872 1002 Pfam SBP domain 156 229 IPR004333 GO:0003677
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car01g00236 Car14g00872 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car01g01616 Car-Chr1:13252764 Car14g00872 Car-Chr14:5138923 3.74E-34 dispersed
Car09g00010 Car-Chr9:62352 Car14g00872 Car-Chr14:5138923 9.21E-37 dispersed
Car11g01603 Car-Chr11:12760660 Car14g00872 Car-Chr14:5138923 5.28E-37 dispersed
Car14g00872 Car-Chr14:5138923 Car18g00237 Car-Chr18:1353627 3.81E-32 dispersed
Car14g01486 Car-Chr14:12333231 Car14g00872 Car-Chr14:5138923 9.45E-09 dispersed
Car01g00236 Car-Chr1:1308868 Car14g00872 Car-Chr14:5138923 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
4677 PF03110 SBP 8.70E-30 No_clan Car TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car14g00872 - - csv:101203103 1759.19