Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car14g00878 ATGTCTCGCCAAGTTCCTACTACTGCGTTCCATAAGTCCAAGACGCTTGATAATAAATATATGCTGGGAGATGAGATCGGAAAAGGAGCATATGGGCGAGTCTACAAGGGTCTGGATTTGGAGAATGGGGACTTCGTTGCTATTAAACAAGTTTCCTTGGAGAATATTGCTCAAGAGGACCTCAACATTATCATGAATTTGAACCACAAAAACATTGTGAAGTATCTTGGATCTCTAAAAACAAAGACTCACCTTCACATAATACTCGAGTATGTGGAGAATGGATCACTTGCCAACATTATCAAGCCAAATAAGTTTGGACCTTTCCCAGAATCATTGGTCGCTGTTTATATTTCTCAGGTTTTGGAAGGCTTGGTTTATCTACATGAGCAGGGTGTAATTCATCGGGACATAAAGGGTGCGAACATACTGACAACCAAAGAGGCAAGGATGAGTGCAACTTCTGTGTGCCTTATTCCTAAGAAAGAGAAGGCCAATAAGGCTTCTTCTTTTGTCACCTCTCGCCTTGAGGTGATCAAGGGGTTTGTCGCCTTAAGGTATGACTCTTGTCCTTTTGAGTTGTCCGTTGATGATTTAGGTAGAGAAGCCCTTGGTCTCGTGAAACTTGCTGATTTTGGTGTTGCGACAAAATTAACAGAGGCTGATGTTAATACTCATTCAGTTGTTGGAACACCTTACTGGATGGCTCCTGAGGTTATTGAAATGTCAGGAGTTTGTGCTGCTTCTGACATATGGAGTGTTGGATGTACTGTGATTGAACTACTTACATGTGTACCTCCATATTATGATCTACAACCTATGCCAGCTCTGTTTCGCATCGTACAGAAGATTGTCATTGGCTCAGTTGGTTTCAAACAGTTTGCTCATTTACAATCTTTCTCTTCTTTATGCCTCGTCAAAGTCAACTTTTTGGAGAATTTGATTGCGGACTTGAGGAATGGTGGTAGGACAAGCATCCTCCAATTCCGGATAGCTTATCACCAGATATCACAGATTTCTTACGCCAGTGCTTTAAGAAGGAAATACATCTCTTTGTTAGTCTATTTTGTAGTGGATGAGCAGTTTGATGTCCTCTTTGTGCAGGATGCCAGGCAAAGGCCCGATGCAAAAACTTTGCTTTCTCATCCTTGGATTCAGAACTGTCGACGGGCCCTGCATTCTTCTCTTCGTCATAGTGGCACATTAAGAAACACTCAACAAGATGGATCAATTGAAGCAGAAATTTCTAATGGAGACGATCAAAACTCTTGTGAAGGCCCTTCAGCAGAAAAAAATGAAGTGACTGATTCTGATTTTAAAGCTGATTCCAGGAAGGAGTTGTCGTCAGATGTTGTCACTGATATGAGCAAGTCCCAAAAAAATTTTGCTTCAGGGCCTAATTCTGTTGAGGAAGCAGAAAGTCTGGAAGATGACACCCTATTGGATCAAGTTCCTACCTTATCCATTCATGAAAATTCATCTCTTCTAACTGGTTCTGGCAGAATTGCTACCTCTGAGCCAATTGGGTTTCATGAATCTCATGGTAGAGCCCGTGATGAAGTGATAATGAATGGTGATGTGCCATCGACAGAACTAAGGGAAGACGCTGCTAGACAACATGGAGAGAAAGAAACTTCAACAACATCTGGAAATAGTTCATTTGGTTTTGAACCTGAAAGTCAGGACAATAGTTTTCAAAAGGTGTCAAAGATGTCAATTGCTTCGGGAGGAAATGAGCTGAGTAAATTTAGTGACACTCCGGGAGATGCTTCCTTAGATGATTTATTTCAACCTTTAGATAAGCTCCCTGGGGATCAAGCTGCTGAAGCATCAACATCTCTATCTACCCTACAATCAAACATGGGTTATCTGTCAGTAAATGATGTTGTAAAAAATGACCTGGCCACAAAATTGAGGGCTACAATTGCTCAAAAGCAAATGGAAAATGAAATGGGACAGGCAAGCAGTGGGGGTGACCTGCTTCGACTAGTGATGGGTGTTTTAAAGGATGATGATATTGATATTGATGGTTTGGTTTTTGATGAGAAGTTATCCGGAGAAAACCTTTTTCCCTTGCAGGCTGTTGAATTTGGCAGATTAGCTGGGTCATTGAGACCTGATGAATCCGAAGATGTAATTGTATCTGCCTGTCAAAAACTGATTGCTATCTTTCATCAAAGGCCTGAGCAGAAAATTGTTTATATTACACAGCATGGTCTACTCCCATTAACAGAGCTGCTTGAAGTTCCTAAAACTCGTATTATATGTTCAGTGCTCCAGCTTATAAATCAGATTGTTAAGGATAACGTTGACTTCCAGGAGAATGCATGTCTTGTTGGTCTAATTCCTCTGGTAATGGGCTTTGCGGTTCCTGATCGTCCCCGAGAGGTTCGTATGGAAGCAGCTTATTTCTTTCAGCAGCTTTGTCAATCAAGCTCTTTGACATTGCAAATGTTCGTTGCTTGCCGTGGAATACCTGTATTAGTAAGCTTTCTAGAGGCTGACTATGCAAAGTACAGGGACATGGTTCACCTAGCTATTGATGGGATGTGGCAGATCTTTAAACTGCAGCGTTCCACTCTTAGAAATGGTTTCTGTCGTATAGCTGCCAAAAGTGGAATCCTGCTTAGGCTCATTAACACCCTCTACAGCTTGAACGAGGCAACTCGCTTAGCTTCCATAACAGTCGGAGCAGGATATCCGGTTGATGGTTTACCTCAACGACCACGATCAGGTCAACTAGACCCTAGCCACCCTATATTCAGTCAGTACGAGGCCTCATTTCCTGTGCCTGATCAGCCTGATCTTTTGAAGGTCAGGCATGGAATAGTTGATCATCACCTGTCTACTGGAACACCAGAACCTTCTAGGGCTTCAACTTCACATTCTCAAAGATCAGATGCCAATCAATCTGATCACCGACAGTTTTTCACCGATGCTGATAGGCCTCAATCTAGCAATACCACAAATGAAGCCTTGGGATCTAAACCGTCAGAGCTAGCATCTTTGGATAAAGTTGTAAATTTAGCAACCAAGGAACCTTATGTCTCTGCTTCTAAAGAACATGAAAATGTAGATAGATGGAGACCTGAGAGGATGGCCAACTCTAACAGGACTTCCACAGATAGGCCTCCAAAATTGCTGGAACCTGTAGCTAATGGATTTCCTACAGCATTGGCAGGTACCCAGCAAGAGCAAGTTCGGCCGCTTCTAAGTCTGTTGGACAAAGAACCCCCGTCTCGACATTTTTCTGGTCAGCTCGAGTACATGCGCCACCTTTCTGGATTGGAAAGGCATGAAACTATAATGCCTCTATTGCATGCATCAAATGAAAAGAAGATAAATGGGGAGCCTGATTTCCTAATGGCAGAATTCGCTGATGTTTCTCAACGTGGAAAAGACAACGGAAACCTTGACCCCACTTCTAAGGTTTCTCTTAAAGCGGTGGCCAAGAAGGTAGGACCCCAGGTTTCCAACGAAGGAGCTGCATCCACATCTGGAATTGCTTCACAGACAGCATCTGGGGTACTTTCAGGTTCGGGTGTATTAAATGCTAGACCAGGGAGTGCAACATCTTCTGGACTTCTTTCGCACATGGTTTCAACTTTGAATGCTGATGTAGCAAGGGAATACCTGGCGAAGGTAGCTGATCTTTTGCTTGAGTTCGCTCAGGCAGATACAACTGTTAAGTCATATATGTGCAGCCAAAGCTTGCTTAATCGCCTTTTCCAAATGTTCAATAGGGTAGAGCCCCCAATTCTCTTGAAGATATTGAAGTGTATAAATCATCTATCAACAGATCCAAACTGCTTAGAAAATCTTCAGCGAGCAGATGCAATTAAATATTTGATTCCGAACCTCGAACTCAAAGAAGGGTCTCTGGTGTCGCAAATACATACTGAGCTGGGAGTTAAGATTTTTGTTTATAAGGCCCTAGGCAGGAAGACTTCCTCTTGGCCCTTTCTCTTTCTCCTCATGGTGGATGCCTCGAGTAGGCTAGTGTTGCTGTTAGGGGAAGGTTCAAAAGCGCTTGGGTTCTTGGAAAAGGGCATTCTTCTCCAAGGGGGCAGGTACATTTGGGTTCTTGGAAAAGGGCATTCTTCTCCATGGGAGCAGGTCCTCAGTGCACTATTCAATTTGTGTAAGATCAATAAGAGGAGACAAGAATATGCAGCTGAAAATGGAATTATTCCACACTTGATGCATTTTATTATATCAGACTCTCCTCTGAAACAATATGCATTGCCTCTACTGTGTGATATGGCCCATGCATCGCGTAATTCTAGGGAGCAGTTAAGAGCCCACGGTGGTCTAGATGTGTATTTGAGCCTGCTTGAGGATGAGCTTTGGTCTGTCACGGCATTGGATTCTATTGCTGTTTGCTTGGCTCATGACAATGACAACCGAAAAGTTGAACAAGCTTTGCTGAAGAAGGATGCTGTCCAGAAATTGGTGAAGTTTTTCCAGTGTTGTCCAGAACAACATTTTGTGCATATATTGGAGCCTTTCTTGAAAATCATCACGAAATCTTCCCGAATCAATACGACTTTGGCTGTCAATGGATTGACCCCATTGCTTATAGCAAGGCTGGACCATCAAGACGCGATTGCTCGGCTTAATCTACTCAAACTGATAAAGGCTGTGTATGAGCATCATCCACGACCCAAGCAATTGATTGTGGAGAATGATTTACCTCATAAACTTCAGAATTTGATTGAGGAACGCAGGGATGGACAACGGTCTGGTGGGCAGGTGTTGGTGAAGCAAATGGCCACATCTTTGCTTAAAGCTCTTCATATAAATACCGTCTTGTAA 4815 42.87 MSRQVPTTAFHKSKTLDNKYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMNLNHKNIVKYLGSLKTKTHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYISQVLEGLVYLHEQGVIHRDIKGANILTTKEARMSATSVCLIPKKEKANKASSFVTSRLEVIKGFVALRYDSCPFELSVDDLGREALGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVIEMSGVCAASDIWSVGCTVIELLTCVPPYYDLQPMPALFRIVQKIVIGSVGFKQFAHLQSFSSLCLVKVNFLENLIADLRNGGRTSILQFRIAYHQISQISYASALRRKYISLLVYFVVDEQFDVLFVQDARQRPDAKTLLSHPWIQNCRRALHSSLRHSGTLRNTQQDGSIEAEISNGDDQNSCEGPSAEKNEVTDSDFKADSRKELSSDVVTDMSKSQKNFASGPNSVEEAESLEDDTLLDQVPTLSIHENSSLLTGSGRIATSEPIGFHESHGRARDEVIMNGDVPSTELREDAARQHGEKETSTTSGNSSFGFEPESQDNSFQKVSKMSIASGGNELSKFSDTPGDASLDDLFQPLDKLPGDQAAEASTSLSTLQSNMGYLSVNDVVKNDLATKLRATIAQKQMENEMGQASSGGDLLRLVMGVLKDDDIDIDGLVFDEKLSGENLFPLQAVEFGRLAGSLRPDESEDVIVSACQKLIAIFHQRPEQKIVYITQHGLLPLTELLEVPKTRIICSVLQLINQIVKDNVDFQENACLVGLIPLVMGFAVPDRPREVRMEAAYFFQQLCQSSSLTLQMFVACRGIPVLVSFLEADYAKYRDMVHLAIDGMWQIFKLQRSTLRNGFCRIAAKSGILLRLINTLYSLNEATRLASITVGAGYPVDGLPQRPRSGQLDPSHPIFSQYEASFPVPDQPDLLKVRHGIVDHHLSTGTPEPSRASTSHSQRSDANQSDHRQFFTDADRPQSSNTTNEALGSKPSELASLDKVVNLATKEPYVSASKEHENVDRWRPERMANSNRTSTDRPPKLLEPVANGFPTALAGTQQEQVRPLLSLLDKEPPSRHFSGQLEYMRHLSGLERHETIMPLLHASNEKKINGEPDFLMAEFADVSQRGKDNGNLDPTSKVSLKAVAKKVGPQVSNEGAASTSGIASQTASGVLSGSGVLNARPGSATSSGLLSHMVSTLNADVAREYLAKVADLLLEFAQADTTVKSYMCSQSLLNRLFQMFNRVEPPILLKILKCINHLSTDPNCLENLQRADAIKYLIPNLELKEGSLVSQIHTELGVKIFVYKALGRKTSSWPFLFLLMVDASSRLVLLLGEGSKALGFLEKGILLQGGRYIWVLGKGHSSPWEQVLSALFNLCKINKRRQEYAAENGIIPHLMHFIISDSPLKQYALPLLCDMAHASRNSREQLRAHGGLDVYLSLLEDELWSVTALDSIAVCLAHDNDNRKVEQALLKKDAVQKLVKFFQCCPEQHFVHILEPFLKIITKSSRINTTLAVNGLTPLLIARLDHQDAIARLNLLKLIKAVYEHHPRPKQLIVENDLPHKLQNLIEERRDGQRSGGQVLVKQMATSLLKALHINTVL 1604
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 5195838 5219096 + Carg11189-RA Car14g00878 160780
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car14g00878 1604 Pfam Protein kinase domain 21 384 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car14g00878 1604 MobiDBLite consensus disorder prediction 452 468 - -
Car14g00878 1604 MobiDBLite consensus disorder prediction 431 451 - -
Car14g00878 1604 MobiDBLite consensus disorder prediction 946 999 - -
Car14g00878 1604 MobiDBLite consensus disorder prediction 980 996 - -
Car14g00878 1604 MobiDBLite consensus disorder prediction 1014 1048 - -
Car14g00878 1604 ProSitePatterns Serine/Threonine protein kinases active-site signature. 133 145 IPR008271 GO:0004672|GO:0006468
Car14g00878 1604 MobiDBLite consensus disorder prediction 399 430 - -
Car14g00878 1604 ProSiteProfiles Protein kinase domain profile. 20 385 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car14g00878 1604 MobiDBLite consensus disorder prediction 1016 1033 - -
Car14g00878 1604 MobiDBLite consensus disorder prediction 543 565 - -
Car14g00878 1604 MobiDBLite consensus disorder prediction 532 565 - -
Car14g00878 1604 MobiDBLite consensus disorder prediction 578 602 - -
Car14g00878 1604 MobiDBLite consensus disorder prediction 399 476 - -
Car14g00878 1604 MobiDBLite consensus disorder prediction 952 966 - -
Car14g00878 1604 ProSitePatterns Protein kinases ATP-binding region signature. 26 49 IPR017441 GO:0005524
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car14g00878 Car-Chr14:5195838 Car17g00232 Car-Chr17:1433358 5.32E-48 dispersed
Car01g00231 Car-Chr1:1259071 Car14g00878 Car-Chr14:5195838 5.61E-127 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
89327 PF00069 Pkinase 2.00E-51 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car14g00878 - - csv:101206469 1651.34