Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car14g00909 ATGATATATTTGAGTATGTGTGGTGGTCCAGAAAAATCCAATTCTGCATCTACTACTTCGGCAAGATTATCTAACCCCAAAGACATGAATCATTTAACTGTTGATTGTGAGGATTCTTTTTATAGTTTACTGGAGCTTGCTTCTGACAACGATGCAGAAGGCTTCAAGAGTATGATGGAGTCTAATTTGTTATCTCTTAACAAGTCTGGACTCTGGTATGTTCGTCAAAAAGGTTCAAAACAAGTCGTTAATGAGCACAGAACACCCCTGATGGTTGCTGCCACATATGGTTGTGTTGATGTTCTGAAGCTTATACTATCATATCCTGAGGTTGATGTTAATCTCTCATCTGGCACAGACAAGAGCACTGCTCTCCACTGTGCTACTTCCAGTGGTTCTGTGAATGCTGTTGATATTGTCGATTTGCTATTATCTGCTGGTGCTGACCCGAAAACCAAGGATGTTAATGGTGACTGCCCTGTGGATGTCATTTTCGTTCACCCGAAATTGCAGAAGCAGAACACAAGGTTCAGGCTAGAGGAGCTTCTCAATAATCATTCAAGTGGATCTTTGGATGTATCCTGTTTACATTTGTCAATCAAAACGCCTGATTCAGATTCACCGCCACTTTCCTCGTCGTTGGAGGATGTGTTTCGATCTACACCCAAGTCTATTTCCTCTCCCAAATTTACTGACGGGTTTGCAAACTCTACAAAGGAGAAAAAAGAATATCCAATTGACCCATCACTTCCTGACATCAAGAACAGCATATATGCAACTGATGAGTTTCGTATGTTCTCTTTCAAGGTGAGACCTTGTTCTCGGGCGTATTCTCATGATTGGACCGAGTGTCCTTTTGTCCACCCAGGGGAGAATGCCCGCAGAAGAGACCCAAGGAAGTTTCATTACAGCTGTGTTCCTTGCCCTGACTTTAGAAAGGGGGCTTGCAGGCATGGGGATATGTGTGAATATGCACATGGAGTATTCGAGTGTTGGCTTCACCCAGCACAGTATCGAACTCGCCTTTGCAAGGATGGCACCAGTTGCAATAGGAGGGTCTGCTTCTTTGCTCACACTAACGAAGAACTAAGGCCATTGTATGTGTCCACTGGATCTGCTGTCCCGTCCCCACGATCAATTGGATCTGCTCCAACTGTAATGGATATGGCTACTGCATTGGGTCTTCTGCCTGGTTCCCCTTCATCAGTGTCAGCTTTATCTCCATCTCCATTTACTCAGACCATGTCTCCCTCTTCTAATGGTGTTTGTCACTCTTCTGTGAACTGGCAGCAACCAAATGTACCGACTCTTCATTTACCAGGAAGTAACCTTCAATCCAGCCGATTGAGGTCGTCTCTGAATGCCAGGGATATGCCTCTGGAAGATTTGAACGTCCTGCCTGACTTCAACAGCCAGCCACGGATTTTGAATGATTTGAACTGTTTCTCTCAACCTTGTCCGACTCCTGTGTCTGTGAGCCGATCTGGCTGGACCCAAACTCTAACTCCTAACAATCTTGAAGAATTATTTTCTTCTGAGATCTCTTCGTCTCCTAGATTCTCCGATCCAGCTGCCAATGTCTTTTCCCCTACGCGCAAATCAACAATGCTAAACCAATTCCAGCAGCAGCAGCAGAACATGTTATCACCTATCAATACAAGCATTATGTCCCCTAAGAATGTTGATCATCATTTGTTGCAGGCCTCTTATGGAGTTTCATCCCCGGGAAGGATGTCGCCAAGAAACACCGAGCCACATTCCCCTATGGGTTCTAGGTTCTCCGCCTTCGTACAGCGTGAAAAGCATAATCTGCGCACTCTCAGTTCAAGGGAGCTTGGATCTAATGTCCCAAGCTCATTGATCGGATCTCCTATCAATTCTTTGCCTAAATGGGGGTCCCCCAATGGAAAGGTGGATTGGTCGGTTGGTAAGAATGAACTGGGTCAACAAATGCGAAGGTCATCTTCTTTTGAAATGGGAAATAACGGGGAGGAGCCTGACTTATCATGGGTTCAAACCCTTGTGAAGGAATCCCCACCTGAGATGCTTAAAGAGAAGCTGGCAGTGCCTGGGAGGGGCGGTGCAGCATCCGGTGAGGGTCTAACTACTACTAAACCACAATTAGAATCCACTGATCATTCTGTGATTGGAGCTTGGCTTGAGCAGATGCAGCTTGATCAGCTTGTAGTGTAG 2193 45.46 MIYLSMCGGPEKSNSASTTSARLSNPKDMNHLTVDCEDSFYSLLELASDNDAEGFKSMMESNLLSLNKSGLWYVRQKGSKQVVNEHRTPLMVAATYGCVDVLKLILSYPEVDVNLSSGTDKSTALHCATSSGSVNAVDIVDLLLSAGADPKTKDVNGDCPVDVIFVHPKLQKQNTRFRLEELLNNHSSGSLDVSCLHLSIKTPDSDSPPLSSSLEDVFRSTPKSISSPKFTDGFANSTKEKKEYPIDPSLPDIKNSIYATDEFRMFSFKVRPCSRAYSHDWTECPFVHPGENARRRDPRKFHYSCVPCPDFRKGACRHGDMCEYAHGVFECWLHPAQYRTRLCKDGTSCNRRVCFFAHTNEELRPLYVSTGSAVPSPRSIGSAPTVMDMATALGLLPGSPSSVSALSPSPFTQTMSPSSNGVCHSSVNWQQPNVPTLHLPGSNLQSSRLRSSLNARDMPLEDLNVLPDFNSQPRILNDLNCFSQPCPTPVSVSRSGWTQTLTPNNLEELFSSEISSSPRFSDPAANVFSPTRKSTMLNQFQQQQQNMLSPINTSIMSPKNVDHHLLQASYGVSSPGRMSPRNTEPHSPMGSRFSAFVQREKHNLRTLSSRELGSNVPSSLIGSPINSLPKWGSPNGKVDWSVGKNELGQQMRRSSSFEMGNNGEEPDLSWVQTLVKESPPEMLKEKLAVPGRGGAASGEGLTTTKPQLESTDHSVIGAWLEQMQLDQLVV 730
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 5436453 5439790 + Carg11220-RA Car14g00909 160811
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car14g00909 730 ProSiteProfiles Zinc finger C3H1-type profile. 307 329 IPR000571 GO:0046872
Car14g00909 730 Pfam Ankyrin repeats (3 copies) 81 154 IPR002110 GO:0005515
Car14g00909 730 ProSiteProfiles Ankyrin repeat region circular profile. 120 154 - -
Car14g00909 730 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 307 327 IPR000571 GO:0046872
Car14g00909 730 ProSiteProfiles Ankyrin repeat profile. 120 155 IPR002110 GO:0005515
Car14g00909 730 MobiDBLite consensus disorder prediction 1 23 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car01g00205 Car14g00909 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car06g00061 Car-Chr6:399944 Car14g00909 Car-Chr14:5436453 0 dispersed
Car14g00415 Car-Chr14:2109824 Car14g00909 Car-Chr14:5436453 0 dispersed
Car14g00909 Car-Chr14:5436453 Car20g00300 Car-Chr20:1736664 2.33E-148 dispersed
Car16g00191 Car-Chr16:1093027 Car14g00909 Car-Chr14:5436453 4.27E-50 dispersed
Car01g00205 Car-Chr1:1119721 Car14g00909 Car-Chr14:5436453 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
4678 PF12796 Ank_2 4.40E-10 CL0465 Car TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car14g00909 - - cpep:111790396 1392.87