Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car14g00954 ATGGCGGGTAAGGCGGCGCCGGCGAGGAATGTTCTGTTTGGAAAATACGAAATGGGTCGGCTATTGGGGAAAGGAACCTTTGCGAAGGTCTATCATGGAACAAACTTGATGACCCACGACAGTGTCGCCATTAAAGTGATCCTCAAGGACAGGGTAAAGAAAGAGGGACTTCTTGAGCAAGTCCGGCGAGAAATTTCTGTCATGGGGTTGGTTCGTCATCCCCATATAGTGGAATTGAAAGAAGTAATGGCCACGAAATCCAAGGTGTATTTTGTGATGGAATACGTTAATGGAGGCGAACTGTTTGTTAAATTGTCTCAACAAGGAAAATTGACAGAAGATGGAGGAAGAAAGTACTTTCAACAGCTTCTCTCCGCCGTGGACTTTTGCCACAGCCGTGGTGTCTCTCACCGTGATTTGAAGCCTGAAAATCTCCTTCTCGACGTGAATGGGAATTTGAAGGTATCTGATTTTGGCCTCTCCGCCCTGCCGGAGCAGCTCCGGATCGACGGATTGCTTCACACACGGTGTGGAACACCGGCGTATGTAGCGCCTGAGGTGCTCAGAAAGAGGGGATACGAGGGCGCTAAGTCGGATCTTTGGTCTTGTGGAGTGATTTTGTTTGTGTTGCTTGCTGGGTCTCTGCCATTTAAAGCTGATAATGTGATGAAGTTGTATAGGAAGATTTTCAAGGCGGAGTTTGAGTTTCCTCCTTGGTTTTCTTCAGAAGCTAAGGAAATGGTGTCAAAGCTTCTGGTTGTTGATCCTGAGAAGAGAGCTTCAATGGATGAGATAATGCAGAGTTGTTGGTTTCAAAAGGGCTTCACAAAGCCACTTTCATTCAATGACAAAGACGAACTCAACAGTGAAATCTCTGACTTGACAAATCCCAAGTTGTTGTCATCTTCTCCTCCTTTCTACAACGCCTTCGAGTTCATTTCCTCAATGTCCTCTGGTTTTGACTTGACTAGTTTGTTTGAAAGCAAGAAGAAACAAGCCTCAATTTTCACTTCAAAATGCTCTGCTTCAGCCATTATAGCCAAGCTTCAGTCTCTAGCGCAGAAGCTGAACTTCAAGGCTACTAATCAGAGGGAGTTCAAGGTGAGACTGCAGGCCAAGGAGGAGGGGAGGAAAGGGAAGCTGGCGGTGACGGTGGAGGTTTACGAGGTAGCGCCGGAGCTGGCGGTGGTCGAGTTCTCGAAGTCGGCAGGGGACACATTGGAGTACAATAAGTTTTGTGAGAAGGATGTGAGGCCTGCATTGAAGGACATCGTTTTTTAA 1281 46.92 MAGKAAPARNVLFGKYEMGRLLGKGTFAKVYHGTNLMTHDSVAIKVILKDRVKKEGLLEQVRREISVMGLVRHPHIVELKEVMATKSKVYFVMEYVNGGELFVKLSQQGKLTEDGGRKYFQQLLSAVDFCHSRGVSHRDLKPENLLLDVNGNLKVSDFGLSALPEQLRIDGLLHTRCGTPAYVAPEVLRKRGYEGAKSDLWSCGVILFVLLAGSLPFKADNVMKLYRKIFKAEFEFPPWFSSEAKEMVSKLLVVDPEKRASMDEIMQSCWFQKGFTKPLSFNDKDELNSEISDLTNPKLLSSSPPFYNAFEFISSMSSGFDLTSLFESKKKQASIFTSKCSASAIIAKLQSLAQKLNFKATNQREFKVRLQAKEEGRKGKLAVTVEVYEVAPELAVVEFSKSAGDTLEYNKFCEKDVRPALKDIVF 426
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 5778599 5779879 + Carg11266-RA Car14g00954 160856
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car14g00954 426 ProSiteProfiles NAF domain profile. 302 327 IPR018451 GO:0007165
Car14g00954 426 ProSitePatterns Protein kinases ATP-binding region signature. 22 54 IPR017441 GO:0005524
Car14g00954 426 ProSiteProfiles Protein kinase domain profile. 16 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car14g00954 426 Pfam NAF domain 304 360 IPR004041 GO:0007165
Car14g00954 426 ProSitePatterns Serine/Threonine protein kinases active-site signature. 135 147 IPR008271 GO:0004672|GO:0006468
Car14g00954 426 Pfam Protein kinase domain 16 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car01g01275 Car-Chr1:11561646 Car14g00954 Car-Chr14:5778599 0 dispersed
Car14g00954 Car-Chr14:5778599 Car10g00439 Car-Chr10:2206179 1.77E-167 dispersed
Car14g00954 Car-Chr14:5778599 Car09g00364 Car-Chr9:1988779 0 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
89331 PF00069 Pkinase 8.30E-75 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car14g00954 - - csv:101218600 760.755