Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Car14g00956 | ATGCCGATCGATACCTCCGCTGCAGTTTCCGGCCAAATTGTGTGCGTCACCGGCGCTGGAGGCTTCATTGCTTCTTGGCTTGTAAAGCTTCTTCTTGAGAAGGGCTACACTGTTCGAGGAACTGTTAGAAACCCAGATGATCAAAAGAATGCTCATTTGAAGCAATTGGATGGAGCTAATGAGCGTCTCTCTTTGTATAGCGCTGATCTTCTTGATTTTGAAAGCCTCAAAGCAGCTATTATGGGCTGCGATGGTGTCTTCCATACTGCCTCTCCAGTCACCGATGACCCCGAAAAGGTGGAACAAGCCATAATTGGTACTAAGAATGTCATGACTGCCGCAGCGGAAGCAAAAGTTCAACGAGTAGTGTTCACATCGTCCATAGGCACCGTCTACATGAACCCTAACCGTAGCCCCGACACGGTGGTGGATGAGTCTTGTTGGAGTGATCTTGACTTTTGCAAGAACACCAAGAATTGGTATTGCTATGCCAAGACAATAGCAGAGCAGACAGCATGGGAAGTTGCAAAAGAAAGAGGAGTGGATTTAGTAGTGGTGAACCCAATGTTGGTATTGGGGCCTCTATTACAAGAGGGTGTGAATGCGAGCGTGGTTCATATAATGAAGTACTTGACAGGGTCAGCCAAGACATATGTAAATGCAGTTCAAGGATATGTTGATGTTAAGGATGTGGCCAAAGCCCATGTGTTGGTTTATGAAACTCCGTCAGCCTCAGGCAGATATATATGCGTTGAGAGCATGCTTCATCGTGGAGAATTGGTTGATGTTCTTGCCAAGTTGTTCCCTCAATATCCACTTCCAACCAAGTGTTCTGATGAGGTGAATCCCAGAAAGAAGCCTTATAAATACAGTGTTGAGAAATTGAAGTCATTGGGAATGGAGTTCACACCAATCACACGATGCATATACGAAACAGTGAAGAGCTTACAAGAAAAGGGTCACCTTCCTCTTCCCTCCCAACTTCAGCATTGA | 993 | 45.62 | MPIDTSAAVSGQIVCVTGAGGFIASWLVKLLLEKGYTVRGTVRNPDDQKNAHLKQLDGANERLSLYSADLLDFESLKAAIMGCDGVFHTASPVTDDPEKVEQAIIGTKNVMTAAAEAKVQRVVFTSSIGTVYMNPNRSPDTVVDESCWSDLDFCKNTKNWYCYAKTIAEQTAWEVAKERGVDLVVVNPMLVLGPLLQEGVNASVVHIMKYLTGSAKTYVNAVQGYVDVKDVAKAHVLVYETPSASGRYICVESMLHRGELVDVLAKLFPQYPLPTKCSDEVNPRKKPYKYSVEKLKSLGMEFTPITRCIYETVKSLQEKGHLPLPSQLQH | 330 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 14 | 5815604 | 5817075 | - | Carg11268-RA | Car14g00956 | 160858 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Car14g00956 | 330 | Pfam | NAD dependent epimerase/dehydratase family | 14 | 244 | IPR001509 | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Car14g00956 | Car-Chr14:5815604 | Car14g00958 | Car-Chr14:5872273 | 0 | dispersed | |
| Car14g00956 | Car-Chr14:5815604 | Car14g00957 | Car-Chr14:5843170 | 0 | tandem | |
| Car02g01046 | Car-Chr2:7281116 | Car14g00956 | Car-Chr14:5815604 | 5.08E-105 | transposed | |
| Car04g00812 | Car-Chr4:4725390 | Car14g00956 | Car-Chr14:5815604 | 4.93E-78 | transposed | |
| Car09g00018 | Car-Chr9:106887 | Car14g00956 | Car-Chr14:5815604 | 5.91E-91 | transposed | |
| Car13g00020 | Car-Chr13:212491 | Car14g00956 | Car-Chr14:5815604 | 7.22E-94 | transposed | |
| Car16g00830 | Car-Chr16:5475168 | Car14g00956 | Car-Chr14:5815604 | 4.23E-40 | transposed | |
| Car18g00943 | Car-Chr18:10104589 | Car14g00956 | Car-Chr14:5815604 | 2.30E-52 | transposed | |
| Car20g00593 | Car-Chr20:3329855 | Car14g00956 | Car-Chr14:5815604 | 5.63E-75 | transposed | |
| Car01g00159 | Car-Chr1:804454 | Car14g00956 | Car-Chr14:5815604 | 2.93E-154 | wgd | |
| Car14g00956 | Car-Chr14:5815604 | Car17g00848 | Car-Chr17:7181299 | 0 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Car14g00956 | K09753 | - | csv:116401652 | 617.461 |