Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car14g00959 ATGGCTGGGCCAACTCCCGATGGCAACTCCGGCAATCCGCCTTCCACGCCTGATTCTCCCACCACCTCCGCCGGTTTCGAAACGGACCAGCTCCCTCATCTCAGCCAAACTTCCGATATCTACCCCGATGAGGACGAAGCCGCTGTTGATCCTCATGTCCTTCCCGACGAGCCTGACCCCGATGAAGAGGAGGAAGGAGAGGATCTCTACCACGACAATTTCTTGGACGATTATCGAAGGATGGACGAGCATGACCAGTACGAGTCCTTGGACCTCGACGATTCATTAGAGGACGAGAGAGATTTGGATCAGATTATGGAGGACAGGCGAGCTGCCGAGATAGAACTGGACACTCGCGATGCTCAGTTCACCCGTCGGAAGCTTCCTGAGCTATTACATGATCAAGACTCGGAGGATGACAATTACAGGCCTTCAAAAAGAGCAAGAGCTGATTTTCGGCCTCCAGCTGCTGCAAGAAGCTATGATGACATTGATGGTATGCAGAGTTCTCCCGGTAGATCACAAAGGGAAACTTCACGAGACGACGTGCCCATTACAGATCATTCTGTTGATGACCAATACGAGGATGAAGACGATGATGAAAATGAGAATGAGATGTATCGTGTTCAAGGGCCACTTAGAGAACATGTTACCATGGATGCAGTTCGGCGCTTTATAGGGAAAAAGTTCAAGAAATTCTTGGAAACATATGTGAATCCAAAGAGTGGAAATGGTGAGCTTGAGTACATGCGACTGATAAATGAGATGGTGTTAGCCAATAGGTGCAGTTTGGAGATTGATTACAAACAGTTTATCTTTGTCCATCCGAATATTGCAATCTGGTTGGCTGATGCACCCCAACCCGTCTTAGAAGTTATGGAAGATGTTGCAAAGAAGGTTGTCTTTGACATACATCCAAACTACAAAAATATCCACCAAAAGATCTATGTTCGCATCAATAATTTACCAGTCTATGATCAGATTCGAAATATTAGGCAAATTCATTTAAATACCATGATTCGAATTGGGGGCGTAGTAACCCGACGCTCTGGTGTCTTCCCCCAGTTGCAGCAGGTGAAGTATGATTGTGGTAAATGTGGCACAGTATTGGGACCTTTTTTTCAGAATTCTTATTCAGAGGTCAAGGTTGGCTCTTGTCCTGAATGCCAGTCGAAAGGGCCATTCACAGTAAATGTTGAGCAGACTATATATAGGAATTACCAAAAGCTAACCCTCCAAGAAAGTCCAGGAATTGTGCCAGCTGGGCGACTTCCTAGGTACAAGGAAGTGATACTATTGAATGATCTTATTGATTGTGCTCGTCCTGGGGAAGAAATTGAAGTCACAGGCATTTATACAAACAATTTTGACTTATCATTAAATACAAAGAACGGTTTTCCTGTATTCTCCACTGTTGTTGAGGCAAATTACATTACCAAGAAGCAAGATCTCTTTTCTGCTTACAAGCTTACCCAGGAAGACAAAGATGAGATTGAGAAGTTGTCTAAAGACCCTAGAATTGGAGAAAGGATAATCAAGTCCATTGCACCATCAATCTATGGTCACGAGGACATAAAAACAGCAATTGCTCTTGCAATGTTTGGAGGTCAAGAAAAAAATGTTGAAGGGAAACACCGGTTACGTGGCGATATCAATGTACTTCTATTAGGTGATCCTGGCACTGCGAAATCTCAATTTCTCAAGTATGTTGAGAAAACTGGTCATAGAGCAGTGTACACAACAGGGAAAGGAGCTTCAGCTGTAGGTCTAACAGCAGCAGTGCACAAGGACCCTGTCACAAGGGAGTGGACCCTTGAAGGAGGTGCCCTTGTATTAGCCGATAGAGGAATCTGTCTTATTGATGAGTTTGACAAAATGAATGATCAGGATAGGGTGAGTATCCATGAAGCAATGGAGCAACAAAGCATTAGCATATCAAAAGCTGGAATAGTCACATCTCTTCAAGCCAGATGTTCTGTCATTGCTGCTGCCAATCCCATTGGAGGAAGGTACGACTCCTCAAAAACTTTCACGCAAAATGTAGAGCTGACCGATCCTATTATTTCTCGATTTGACATCCTCTGCGTTGTTAAGGATGTGGTGGACTCTGTAACAGACGAGATGCTTGCTAAGTTTGTGGTTGATAGTCATTTCAAGTCACAACCAAAGGGCGCCAATATTGATGACAAGTCTATAAATGAATCTCAGGAGGACAGTCAAGACTCTGCAGGGCCACTGGATTCGGAGGTGCTCCCCCAAGATCTGCTGAGGAAGTACATAACTTATTCTAAGTTGAATGTTTTTCCAAGGTTGCATGATGCTGATATGGATAAGTTAACACACGTCTATGCAGAATTACGAAGGGAATCTTCTCATGGGCAAGGAGTTCCTATTGCAGTTAGGCACATAGAGTCAATGATACGCATGTCTGAAGCACATGCAAGAATGCACCTTAGACAGCACGTCACACAAGAAGATGTTGATATGGCAATTCGTGTGTTACTGGATTCTTTCATTTCAACCCAAAAATTTGGAGTGCAGAAAGCTCTGCAAAAGGTATAA 2562 43.95 MAGPTPDGNSGNPPSTPDSPTTSAGFETDQLPHLSQTSDIYPDEDEAAVDPHVLPDEPDPDEEEEGEDLYHDNFLDDYRRMDEHDQYESLDLDDSLEDERDLDQIMEDRRAAEIELDTRDAQFTRRKLPELLHDQDSEDDNYRPSKRARADFRPPAAARSYDDIDGMQSSPGRSQRETSRDDVPITDHSVDDQYEDEDDDENENEMYRVQGPLREHVTMDAVRRFIGKKFKKFLETYVNPKSGNGELEYMRLINEMVLANRCSLEIDYKQFIFVHPNIAIWLADAPQPVLEVMEDVAKKVVFDIHPNYKNIHQKIYVRINNLPVYDQIRNIRQIHLNTMIRIGGVVTRRSGVFPQLQQVKYDCGKCGTVLGPFFQNSYSEVKVGSCPECQSKGPFTVNVEQTIYRNYQKLTLQESPGIVPAGRLPRYKEVILLNDLIDCARPGEEIEVTGIYTNNFDLSLNTKNGFPVFSTVVEANYITKKQDLFSAYKLTQEDKDEIEKLSKDPRIGERIIKSIAPSIYGHEDIKTAIALAMFGGQEKNVEGKHRLRGDINVLLLGDPGTAKSQFLKYVEKTGHRAVYTTGKGASAVGLTAAVHKDPVTREWTLEGGALVLADRGICLIDEFDKMNDQDRVSIHEAMEQQSISISKAGIVTSLQARCSVIAAANPIGGRYDSSKTFTQNVELTDPIISRFDILCVVKDVVDSVTDEMLAKFVVDSHFKSQPKGANIDDKSINESQEDSQDSAGPLDSEVLPQDLLRKYITYSKLNVFPRLHDADMDKLTHVYAELRRESSHGQGVPIAVRHIESMIRMSEAHARMHLRQHVTQEDVDMAIRVLLDSFISTQKFGVQKALQKV 853
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 5910123 5915076 + Carg11271-RA Car14g00959 160861
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car14g00959 853 CDD AAA 552 693 - -
Car14g00959 853 Pfam MCM P-loop domain 495 717 IPR001208 GO:0003677|GO:0005524|GO:0032508
Car14g00959 853 Pfam Mini-chromosome maintenance protein 2 44 199 IPR008045 GO:0003677|GO:0005524|GO:0005634|GO:0006270|GO:0042555|GO:1905775
Car14g00959 853 Pfam MCM N-terminal domain 228 321 IPR027925 -
Car14g00959 853 ProSitePatterns MCM family signature. 616 624 IPR018525 GO:0003677|GO:0005524|GO:0006260
Car14g00959 853 Pfam MCM AAA-lid domain 754 838 IPR041562 -
Car14g00959 853 MobiDBLite consensus disorder prediction 723 748 - -
Car14g00959 853 MobiDBLite consensus disorder prediction 8 37 - -
Car14g00959 853 MobiDBLite consensus disorder prediction 1 68 - -
Car14g00959 853 Pfam MCM OB domain 327 454 IPR033762 -
Car14g00959 853 MobiDBLite consensus disorder prediction 113 158 - -
Car14g00959 853 MobiDBLite consensus disorder prediction 113 203 - -
Car14g00959 853 ProSiteProfiles MCM family domain profile. 507 713 IPR001208 GO:0003677|GO:0005524|GO:0032508
Car14g00959 853 MobiDBLite consensus disorder prediction 175 190 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car08g00380 Car-Chr8:2458315 Car14g00959 Car-Chr14:5910123 5.45E-102 dispersed
Car12g01142 Car-Chr12:11075178 Car14g00959 Car-Chr14:5910123 6.51E-106 dispersed
Car14g00959 Car-Chr14:5910123 Car17g00984 Car-Chr17:7900030 2.07E-103 dispersed
Car14g00959 Car-Chr14:5910123 Car06g01490 Car-Chr6:10509629 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car14g00959 K02540 - csv:101219546 1577.76