Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car14g00972 ATGTGGGATCTCAATGATTCGCCCGATCATGGCGGAACTGATGAATTTGAGGGCCTTTCGTCGATTGACGGCGATGATGACAGAGCGAAATGGGTTGGATCAATTAATTCCAACTCTAGCTCTTCAGCAGTGGTTTTGGAGGATGGATCCGACGCCGATGAAGCCAGCGTCGGCGAGCGCGAACACCCAGTCTCCCGGGAAAGCTTCTCGGCAACCCACCCGCCGGCAACTCGTCAGTTCTTCCCGCTGGAGAATTCCAACGTGGATGCTTCATCCGCCAGTGGCGGTGGCGGTGGTTCGACTGCGTTTCCACGAGCTCGGTGGTTCGGCGTGAAGTTCTGCCAGACAGAGCCTGTCTCCGCCGTGAGACCAATGGCGGTTCTGCAACCAATAAAGAAAAGTCGACGAGGGCCAAGGTCTCGAAGCTCTCAATATCGCGGCGTCACGTTTTACCGGCGAACCGGCCGGTGGGAATCTCATATATGGGACTGTGGCAAACAAGTTTATCTGGGCGGATTTGACACTGCTCATTCAGCTGCTCGGTTAGCCTCTGATTTTAACATAGCTTATGACAGGGCAGCTATAAAGTTTCGAGGAACAGATGCAGACATAAACTTCAGTATTGAAGACTACGAGGAGGATTTGAAGCAGATGGGGAAGTTAACAAAGGAAGAATTTGTTCATGTTCTTCGTAGACAAAGTACAGGTTATCCAAGGGGAAGCTCAAAATTTAGAGGCGTAACATTGCACAAATGTGGAAGATGGGAGGCTCGTATGGGCCAATTCTTAGGCAAAAAGTACGTTTATCTGGGGTTGTTCGATTCCGAAATCGAAGCTGCAAGAGCTTATGACAAAGCTGCTATCAAATGTAATGGCAAGGAAGCTGTCACAAACTTTGATCCCACCATATATGAGAATGAGCTTAGAACAGATACATCATCAGGCAATGCGTTGGAACAAAATCTTGATTTGAGGTTAGGAAATTCAAGCTCAAAACAACACACAAATGATATGCAAAATAAGGAATCACATGTACTTGAGAAGATGCAGTTTGGTAGCGAAACGATCGTTCGATGTCCACGCTCCATCGACGCAACGATACATGGGCAGTCTCCATATATCAATGAATCAAACTCTGAGATCGATGTGTCGCTGAGTTTGAGTGAAAGGCAGCAATGGCAGCAAGGTTGTGGTGGCTATGAACAAATTGGAACAGCGGCAGCAGCATCATCAGGATTCCCACAAATTCAGGTTTCAAGTTCACCAAATTGGGTGAAGAAAAAATAA 1287 47.47 MWDLNDSPDHGGTDEFEGLSSIDGDDDRAKWVGSINSNSSSSAVVLEDGSDADEASVGEREHPVSRESFSATHPPATRQFFPLENSNVDASSASGGGGGSTAFPRARWFGVKFCQTEPVSAVRPMAVLQPIKKSRRGPRSRSSQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHSAARLASDFNIAYDRAAIKFRGTDADINFSIEDYEEDLKQMGKLTKEEFVHVLRRQSTGYPRGSSKFRGVTLHKCGRWEARMGQFLGKKYVYLGLFDSEIEAARAYDKAAIKCNGKEAVTNFDPTIYENELRTDTSSGNALEQNLDLRLGNSSSKQHTNDMQNKESHVLEKMQFGSETIVRCPRSIDATIHGQSPYINESNSEIDVSLSLSERQQWQQGCGGYEQIGTAAAASSGFPQIQVSSSPNWVKKK 428
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 6919663 6921994 - Carg24260-RA Car14g00972 160874
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car14g00972 428 MobiDBLite consensus disorder prediction 1 80 - -
Car14g00972 428 MobiDBLite consensus disorder prediction 32 46 - -
Car14g00972 428 ProSiteProfiles AP2/ERF domain profile. 144 207 IPR001471 GO:0003700|GO:0006355
Car14g00972 428 ProSiteProfiles AP2/ERF domain profile. 243 300 IPR001471 GO:0003700|GO:0006355
Car14g00972 428 MobiDBLite consensus disorder prediction 53 67 - -
Car14g00972 428 Pfam AP2 domain 242 291 IPR001471 GO:0003700|GO:0006355
Car14g00972 428 Pfam AP2 domain 144 190 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car02g00621 Car-Chr2:4684407 Car14g00972 Car-Chr14:6919663 1.80E-101 dispersed
Car04g00244 Car-Chr4:1361453 Car14g00972 Car-Chr14:6919663 2.29E-24 dispersed
Car06g00295 Car-Chr6:1651111 Car14g00972 Car-Chr14:6919663 1.96E-71 dispersed
Car07g00688 Car-Chr7:3534692 Car14g00972 Car-Chr14:6919663 5.77E-136 dispersed
Car07g00921 Car-Chr7:5119172 Car14g00972 Car-Chr14:6919663 8.57E-91 dispersed
Car14g00161 Car-Chr14:752508 Car14g00972 Car-Chr14:6919663 2.52E-10 dispersed
Car14g00972 Car-Chr14:6919663 Car05g00104 Car-Chr5:544015 8.76E-45 dispersed
Car14g00972 Car-Chr14:6919663 Car03g00873 Car-Chr3:6972936 4.00E-122 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
4682 PF00847 AP2 1.70E-09 CL0081 Car TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car14g00972 K09284 - csv:101208665 620.157