Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Car14g00972 | ATGTGGGATCTCAATGATTCGCCCGATCATGGCGGAACTGATGAATTTGAGGGCCTTTCGTCGATTGACGGCGATGATGACAGAGCGAAATGGGTTGGATCAATTAATTCCAACTCTAGCTCTTCAGCAGTGGTTTTGGAGGATGGATCCGACGCCGATGAAGCCAGCGTCGGCGAGCGCGAACACCCAGTCTCCCGGGAAAGCTTCTCGGCAACCCACCCGCCGGCAACTCGTCAGTTCTTCCCGCTGGAGAATTCCAACGTGGATGCTTCATCCGCCAGTGGCGGTGGCGGTGGTTCGACTGCGTTTCCACGAGCTCGGTGGTTCGGCGTGAAGTTCTGCCAGACAGAGCCTGTCTCCGCCGTGAGACCAATGGCGGTTCTGCAACCAATAAAGAAAAGTCGACGAGGGCCAAGGTCTCGAAGCTCTCAATATCGCGGCGTCACGTTTTACCGGCGAACCGGCCGGTGGGAATCTCATATATGGGACTGTGGCAAACAAGTTTATCTGGGCGGATTTGACACTGCTCATTCAGCTGCTCGGTTAGCCTCTGATTTTAACATAGCTTATGACAGGGCAGCTATAAAGTTTCGAGGAACAGATGCAGACATAAACTTCAGTATTGAAGACTACGAGGAGGATTTGAAGCAGATGGGGAAGTTAACAAAGGAAGAATTTGTTCATGTTCTTCGTAGACAAAGTACAGGTTATCCAAGGGGAAGCTCAAAATTTAGAGGCGTAACATTGCACAAATGTGGAAGATGGGAGGCTCGTATGGGCCAATTCTTAGGCAAAAAGTACGTTTATCTGGGGTTGTTCGATTCCGAAATCGAAGCTGCAAGAGCTTATGACAAAGCTGCTATCAAATGTAATGGCAAGGAAGCTGTCACAAACTTTGATCCCACCATATATGAGAATGAGCTTAGAACAGATACATCATCAGGCAATGCGTTGGAACAAAATCTTGATTTGAGGTTAGGAAATTCAAGCTCAAAACAACACACAAATGATATGCAAAATAAGGAATCACATGTACTTGAGAAGATGCAGTTTGGTAGCGAAACGATCGTTCGATGTCCACGCTCCATCGACGCAACGATACATGGGCAGTCTCCATATATCAATGAATCAAACTCTGAGATCGATGTGTCGCTGAGTTTGAGTGAAAGGCAGCAATGGCAGCAAGGTTGTGGTGGCTATGAACAAATTGGAACAGCGGCAGCAGCATCATCAGGATTCCCACAAATTCAGGTTTCAAGTTCACCAAATTGGGTGAAGAAAAAATAA | 1287 | 47.47 | MWDLNDSPDHGGTDEFEGLSSIDGDDDRAKWVGSINSNSSSSAVVLEDGSDADEASVGEREHPVSRESFSATHPPATRQFFPLENSNVDASSASGGGGGSTAFPRARWFGVKFCQTEPVSAVRPMAVLQPIKKSRRGPRSRSSQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHSAARLASDFNIAYDRAAIKFRGTDADINFSIEDYEEDLKQMGKLTKEEFVHVLRRQSTGYPRGSSKFRGVTLHKCGRWEARMGQFLGKKYVYLGLFDSEIEAARAYDKAAIKCNGKEAVTNFDPTIYENELRTDTSSGNALEQNLDLRLGNSSSKQHTNDMQNKESHVLEKMQFGSETIVRCPRSIDATIHGQSPYINESNSEIDVSLSLSERQQWQQGCGGYEQIGTAAAASSGFPQIQVSSSPNWVKKK | 428 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
14 | 6919663 | 6921994 | - | Carg24260-RA | Car14g00972 | 160874 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Car14g00972 | 428 | MobiDBLite | consensus disorder prediction | 1 | 80 | - | - | |
Car14g00972 | 428 | MobiDBLite | consensus disorder prediction | 32 | 46 | - | - | |
Car14g00972 | 428 | ProSiteProfiles | AP2/ERF domain profile. | 144 | 207 | IPR001471 | GO:0003700|GO:0006355 | |
Car14g00972 | 428 | ProSiteProfiles | AP2/ERF domain profile. | 243 | 300 | IPR001471 | GO:0003700|GO:0006355 | |
Car14g00972 | 428 | MobiDBLite | consensus disorder prediction | 53 | 67 | - | - | |
Car14g00972 | 428 | Pfam | AP2 domain | 242 | 291 | IPR001471 | GO:0003700|GO:0006355 | |
Car14g00972 | 428 | Pfam | AP2 domain | 144 | 190 | IPR001471 | GO:0003700|GO:0006355 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Car02g00621 | Car-Chr2:4684407 | Car14g00972 | Car-Chr14:6919663 | 1.80E-101 | dispersed | |
Car04g00244 | Car-Chr4:1361453 | Car14g00972 | Car-Chr14:6919663 | 2.29E-24 | dispersed | |
Car06g00295 | Car-Chr6:1651111 | Car14g00972 | Car-Chr14:6919663 | 1.96E-71 | dispersed | |
Car07g00688 | Car-Chr7:3534692 | Car14g00972 | Car-Chr14:6919663 | 5.77E-136 | dispersed | |
Car07g00921 | Car-Chr7:5119172 | Car14g00972 | Car-Chr14:6919663 | 8.57E-91 | dispersed | |
Car14g00161 | Car-Chr14:752508 | Car14g00972 | Car-Chr14:6919663 | 2.52E-10 | dispersed | |
Car14g00972 | Car-Chr14:6919663 | Car05g00104 | Car-Chr5:544015 | 8.76E-45 | dispersed | |
Car14g00972 | Car-Chr14:6919663 | Car03g00873 | Car-Chr3:6972936 | 4.00E-122 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
4682 | PF00847 | AP2 | 1.70E-09 | CL0081 | Car | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Car14g00972 | K09284 | - | csv:101208665 | 620.157 |