Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Car14g00996 | TTTTTGGCAGACCCCATAGCATGTAGGCTCCTTGATCCCATTGGTATTCAAAACATCAACGGTGCATGGCGCAATGGTCGTGCCACCTTCTACGGTGACATGACGGGTGGCGAAACTATGCAGGGAGCTTGCGGGTATGGAAACCTATACGATCAAGGTTACGGGCTAGAGACGGCAGCGATAAGCACAGCACTTTTCAACAATGGACTAACCTGTGGAGCATGCTTCGAGTTAAAGTGCCTGCCCGGAGGACACTATTCGTGCCTACCAAACTCGGGCACAATCAAAATAACCGCCACAAACTTTTGCCCTCCAAACTACGCGAAAACAGAAGGCGTTTGGTGCAATCCACCCCAAGAGCACTTCGACCTTTCTCTCTACATGTTTACTAAAATCGCCCCTTATCGTGCTGGTGTCATCAATGTTAGCTATCGTAGGGTACTCTGCCAGAAAAAGGGTGGCCTCCGGTTCCAATTAAATGGAAACCCATATTGGCTTATCGTCCTACCCTTCAATGTTGGAGGTGCTGGTGATGTTGTTGGTGTTAACATTAAAGGCTCTTCTACTGGGTGGCTTAAGATGTCCAAGAACTGGGGCCAAAATTGGGAGATTGGTACCGTTTTGGTGGGCCAGATCCTGTCCTTTCAAGTCACTACCAGCGATTGGAATACCATTCAATTTGATAATGTTGTGCCTAGCTCTTGGCAGTTCGGCCAAACCTTTGAAGGGAAGCATAATTTCTAG | 744 | 47.98 | FLADPIACRLLDPIGIQNINGAWRNGRATFYGDMTGGETMQGACGYGNLYDQGYGLETAAISTALFNNGLTCGACFELKCLPGGHYSCLPNSGTIKITATNFCPPNYAKTEGVWCNPPQEHFDLSLYMFTKIAPYRAGVINVSYRRVLCQKKGGLRFQLNGNPYWLIVLPFNVGGAGDVVGVNIKGSSTGWLKMSKNWGQNWEIGTVLVGQILSFQVTTSDWNTIQFDNVVPSSWQFGQTFEGKHNF | 247 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 14 | 7797640 | 7798477 | - | Carg28282-RA | Car14g00996 | 160898 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Car14g00996 | 247 | Pfam | Lytic transglycolase | 58 | 144 | IPR009009 | - | |
| Car14g00996 | 247 | ProSiteProfiles | Expansin, family-45 endoglucanase-like domain profile. | 41 | 154 | IPR007112 | - | |
| Car14g00996 | 247 | ProSiteProfiles | Expansin, Cellulose-binding-like domain profile. | 164 | 243 | IPR007117 | - | |
| Car14g00996 | 247 | Pfam | Expansin C-terminal domain | 156 | 232 | IPR007117 | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Car14g00996 | Car-Chr14:7797640 | Car04g01084 | Car-Chr4:6245571 | 1.20E-97 | dispersed | |
| Car14g00994 | Car-Chr14:7558331 | Car14g00996 | Car-Chr14:7797640 | 1.88E-158 | proximal |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Car14g00996 | - | - | cpep:111789769 | 513.842 |