Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car14g01007 CTTGGTGGTGACATTGGAGGCCTTACTGAACTTAAATCATTGGACCTTTCAGCGAATCGAGGCCTCATTGGTTCAATCTCCCGGGCGCTTGGGAATTTGCTGAAATTGGATACCTTGAGCCTTTCTGCGTGTGGATTTAGTGGTACAATTCCGGAAGAACTAGGCAATCTTACTGAGCTAACCTTCTTGTCTTTATATTCAAACAATTTCTCTGGAACCATACCGGCTACTCTAGGAAAACTCTCCAAACTCTACTGGCTAGACCTGGCAGATAATAAGTTGACTGGTGCTCTTCCAGTTTCCACTTCCGAATCTCCGGGTTTAGATCAACTTTCTGGGGCTAAACATTTTCATTTCAGCAAAAACAAGCTGTCAGGAGCCATTCCACCTGAACTTTTTACCTCTGAGATGGAATTATTACACATATTATTTGACGGGAATAATTTTTCTGGGAGTATCCCACCAACATTAGGACTTGTTCAGTCCCTTGAGGTTCTTCGACTTGATCGAAATTCTTTAACAGGCAATGTCCCATCAACTCTGAGCAACCTAATTAATATCAATGCATTGCATTTGGCCAACAATAAGCTAACAGGTCCACTACCAAACTTTACTCAAATGAGTTCACTAAGTCACGTGGACCTTAGTAACAACTCATTTAACTCATCAGTAGCTCCGGAATGGTTCTCAACTCTACAATCTCTCACCACTCTTATTGTTGAATATGGGTCAATACGAGGAACTCTGCCAGAAGGAATCTTTATCTTACCACATATACAGCAAATAAAACTGAAGAACAATGCATTTGGTGGGACATTAATTATGGGTGACAGCATCAGCCAATCGTTGCAGCAAGTTGATTTGCAAAATAACGATATTTCCTCAGTTACCTCTCTTTCGGGATATACTAACACATTGATGCTGTCGGGAAATCCTGTGTGTAAAACTAGTGTCCTCTCAAATACGAACTATTGCCACCTTCAACAGCAACAAACAAAACCATATTCTACGAGCCTTGTCAATTGTGGTAGTAAGTCATGTTCTCCTGATGAGAAGCTGAACCCTCAGAGTTGTGAATGTGCCTATCCATATGAAGGGACCTTATACTTTAAAGGATCCTCTTTCCGGGAATTGTCCAATATAACTCTATTTCACTCATTGGAAACGAGCCTTTTTAAAACTTTCAACAGCACGCCTTTTATTCAAAGCCCTTTCGTTAATATTGATGATTATCTTCAGATACAACTTGCACTTTTTCCATCCCACGATAAGTATTTCAGTAGGGAAGACATCCAGAAAATTGGGTTTGAATTGTACCATCATAATTTCCAGCCTCCCGATATGTTTGGGCCATACACTTTCAATGCATCTCCTTATCATTTTCCAGCCATCAATGGGGGATCAGATTCAACGAACACCAGAATGGTAATTGGAATAGCTGTTGGCTCTGCCTTTCTTGTTCTATGCCTCATTGGAGTTGGAACATATGCAATTCAACAAAAGAGACGTGCAGAAAAGGCCCAGCCACATGGAAACGATAGTGGAGATGCGCCACAATTAAAGGGAGCCAGATGGTTTTCTTATGATGAACTTAAACAATGCACAAATAATTTCTCCACGAGTAACGTGATAGGATCCGGAGGATTTGGCATGGTATACAGAGGAACGCTGAAGGATGGAAAAGTAGTTGCAATCAAAAGAGCTCAACAAAGATCAATGCAGGGTGGCCTTGAGTTCAAGACAGAAATTGAGCTTCTTTCACGAGTTCATCACAAGAATCTTCTAGGCCTAGTGGGATTTTGTTCCGAACAAGGAGAACAGATTCTTGTTTATGAATTCATGCCTAATGGGACACTTAGAGAGAGCCTATCTGGAAAATCGGGTATTTATCTTGATTGGAAGAGAAGACTTCGTATCGCACTTGGGTCGGCCAGAGGCCTGACTTACTTACATGAGCTTGCTAATCCTCCCATAATCCATAGAGATATTAAGTCCACCAACATTTTACTAGATGAACGTTTAAATGCAAAGGTTGCAGATTTTGGCTTGTCCAAGCTCGTCTCAGACAGTGGAAAGGGACATGTTTCTACTCAAGTCAAAGGTACAATGGGTTATTTGGATCCTGAATATTACATGAGTGAACAATTGACTGAGAAAAGTGATGTATACAGCTTTGGAATAGTTATGTTGGAATTGATAACTGCTAAGCTGCCAATTGAGAAAGGAAAGCACATAGTTCGTGAGGTGCGTACGTTGATGAATAAGAGTGATGAAGAATATTATGGTTTGAAGGATATAATGGATAAATCCATCATCGTTAATACAACAAATCTTATTGGGTTCGGAAGGTTCTTAGAGTTGGGCATGCAATGTGTTGAAGAGGCTGCTGCAGAGCGTCCCACAATGAGTGATGTGGTTAAGGCAATTGAGAGCATTTTGCAGAATGATGGAATCAATACAAGCTCAACCTCAGCATCCTCATCCGCCACAGACTTTGGGGCTTCCAAAGTTGCTTCCAGACATCCTTATAATGATGCTATACTCAAAGAGGGTGTCAACAGCCAATGA 2568 41.0 LGGDIGGLTELKSLDLSANRGLIGSISRALGNLLKLDTLSLSACGFSGTIPEELGNLTELTFLSLYSNNFSGTIPATLGKLSKLYWLDLADNKLTGALPVSTSESPGLDQLSGAKHFHFSKNKLSGAIPPELFTSEMELLHILFDGNNFSGSIPPTLGLVQSLEVLRLDRNSLTGNVPSTLSNLININALHLANNKLTGPLPNFTQMSSLSHVDLSNNSFNSSVAPEWFSTLQSLTTLIVEYGSIRGTLPEGIFILPHIQQIKLKNNAFGGTLIMGDSISQSLQQVDLQNNDISSVTSLSGYTNTLMLSGNPVCKTSVLSNTNYCHLQQQQTKPYSTSLVNCGSKSCSPDEKLNPQSCECAYPYEGTLYFKGSSFRELSNITLFHSLETSLFKTFNSTPFIQSPFVNIDDYLQIQLALFPSHDKYFSREDIQKIGFELYHHNFQPPDMFGPYTFNASPYHFPAINGGSDSTNTRMVIGIAVGSAFLVLCLIGVGTYAIQQKRRAEKAQPHGNDSGDAPQLKGARWFSYDELKQCTNNFSTSNVIGSGGFGMVYRGTLKDGKVVAIKRAQQRSMQGGLEFKTEIELLSRVHHKNLLGLVGFCSEQGEQILVYEFMPNGTLRESLSGKSGIYLDWKRRLRIALGSARGLTYLHELANPPIIHRDIKSTNILLDERLNAKVADFGLSKLVSDSGKGHVSTQVKGTMGYLDPEYYMSEQLTEKSDVYSFGIVMLELITAKLPIEKGKHIVREVRTLMNKSDEEYYGLKDIMDKSIIVNTTNLIGFGRFLELGMQCVEEAAAERPTMSDVVKAIESILQNDGINTSSTSASSSATDFGASKVASRHPYNDAILKEGVNSQ 855
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 8275514 8280459 + Carg27806-RA Car14g01007 160909
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car14g01007 855 ProSiteProfiles Leucine-rich repeat profile. 282 303 IPR001611 GO:0005515
Car14g01007 855 ProSitePatterns Protein kinases ATP-binding region signature. 544 566 IPR017441 GO:0005524
Car14g01007 855 Pfam Protein tyrosine and serine/threonine kinase 540 807 IPR001245 GO:0004672|GO:0006468
Car14g01007 855 ProSiteProfiles Protein kinase domain profile. 538 813 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car14g01007 855 ProSitePatterns Serine/Threonine protein kinases active-site signature. 658 670 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car03g00240 Car-Chr3:3642283 Car14g01007 Car-Chr14:8275514 1.36E-23 dispersed
Car06g00151 Car-Chr6:931172 Car14g01007 Car-Chr14:8275514 0 dispersed
Car14g01007 Car-Chr14:8275514 Car20g00884 Car-Chr20:8680461 7.23E-97 dispersed
Car14g01529 Car-Chr14:12583450 Car14g01007 Car-Chr14:8275514 1.54E-41 dispersed
Car20g00319 Car-Chr20:1829534 Car14g01007 Car-Chr14:8275514 3.04E-74 dispersed
Car20g00883 Car-Chr20:8677069 Car14g01007 Car-Chr14:8275514 5.04E-07 dispersed
Car14g01007 Car-Chr14:8275514 Car14g00001 Car-Chr14:1758 0 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
89332 PF07714 PK_Tyr_Ser-Thr 1.30E-45 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car14g01007 - - bhj:120091485 1402.88