Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Car14g01008 | ATGATGCCTTTCACCTTGGTTTCTGCATGGAACAAGAGGCGTAGACGAAAAAAGTCATCACAATTAGAACACCAAACGGAGGACCCTTGGATCTATAGACCGGCTGAGTTGTGGCAGCTTCAAGATCAAACCCTTCAAACACCCCCCAAAAGACACCATGCTTCCACTGTCTTCACCCTTAGGGAAATGGAAGAGGCCACCTGTTCCTTTAGCGACGCCAACTTGCTCGGTAAAGGCGGCTTTGGTCGCGTTTATCGAGCCACCTTGCGGTCGGGAGAGGTGGTAGCGGTCAAGAAAATGGAGCTGCCACCATTTAAGGAAGCAGAAGGGGAGCGTGAGTTCCGAGTGGAAGTGGACATTCTGAGCAGATTGGACCATCCAAATCTTGTTTCGTTGATTGGGTATTGTGCGGATGGGAAGCATCGGTTTCTAGTTTATGAGTACATGCACAAAGGGAACCTTCAAGATCATTTAAATGGGATCGGAGAATCTAAGATGGATTGGGGAGGGAGGCTGAAAGTGGCACTTGGGGCTGCCAAGGGATTGGCCTATCTCCATTCAAGCTCCGCTGCTGGGATGCCTATTGTCCATAGGGATTTCAAGTCCACAAATATTCTTCTTGACTCCAACTTGGATGCAAAGATATCAGACTTTGGACTTGCAAAGTTGATGCCAGAAGGACAAGAATCACATGTGACTGCAAGAGTCCTCGGCACGTTTGGATACTTCGACCCTGAGTATACTTCGACAGGAAAACTGAGCGTGCAGAGTGATGTGTATGCCTTTGGAGTGGTTCTTCTTGAGCTCCTCACAGGGCGCCGAGCAGTGGACTTGAACCAGGGCCCCAATGATCAAAACCTTGTCGTACAGGTAAGGCATATATTGAATGATCGAAAAAAGTTACGTAAAGTGATAGATCCTGAGATGAGTCGAAGTTCATACACAATGGAATCCATAGCCATATTTGCAAACTTGGCTTCACGCTGCGTCCGGACAGAGAGCAGTGAAAGGCCAACAATGATAGAATGTGTAAGAGAGCTTCAAATGATTATCTACACAAAGTTGCAAGGCCGCAAGGGCTAG | 1083 | 47.74 | MMPFTLVSAWNKRRRRKKSSQLEHQTEDPWIYRPAELWQLQDQTLQTPPKRHHASTVFTLREMEEATCSFSDANLLGKGGFGRVYRATLRSGEVVAVKKMELPPFKEAEGEREFRVEVDILSRLDHPNLVSLIGYCADGKHRFLVYEYMHKGNLQDHLNGIGESKMDWGGRLKVALGAAKGLAYLHSSSAAGMPIVHRDFKSTNILLDSNLDAKISDFGLAKLMPEGQESHVTARVLGTFGYFDPEYTSTGKLSVQSDVYAFGVVLLELLTGRRAVDLNQGPNDQNLVVQVRHILNDRKKLRKVIDPEMSRSSYTMESIAIFANLASRCVRTESSERPTMIECVRELQMIIYTKLQGRKG | 360 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
14 | 8279901 | 8283259 | - | Carg27807-RA | Car14g01008 | 160910 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Car14g01008 | 360 | PANTHER | SERINE/THREONINE-PROTEIN KINASE PBL28-RELATED | 1 | 357 | - | - | |
Car14g01008 | 360 | Gene3D | Transferase(Phosphotransferase) domain 1 | 149 | 358 | - | - | |
Car14g01008 | 360 | ProSitePatterns | Protein kinases ATP-binding region signature. | 76 | 99 | IPR017441 | GO:0005524 | |
Car14g01008 | 360 | CDD | STKc_IRAK | 76 | 348 | - | - | |
Car14g01008 | 360 | ProSiteProfiles | Protein kinase domain profile. | 70 | 351 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Car14g01008 | 360 | Gene3D | Phosphorylase Kinase; domain 1 | 35 | 148 | - | - | |
Car14g01008 | 360 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 195 | 207 | IPR008271 | GO:0004672|GO:0006468 | |
Car14g01008 | 360 | SUPERFAMILY | Protein kinase-like (PK-like) | 47 | 352 | IPR011009 | - | |
Car14g01008 | 360 | Pfam | Protein kinase domain | 72 | 345 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Car14g01008 | 360 | PANTHER | OS01G0750732 PROTEIN | 1 | 357 | - | - | |
Car14g01008 | 360 | PIRSF | ILK | 38 | 359 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Car14g01008 | Car-Chr14:8279901 | Car08g00002 | Car-Chr8:8045 | 1.46E-92 | dispersed | |
Car14g01008 | Car-Chr14:8279901 | Car14g01463 | Car-Chr14:12216354 | 5.98E-92 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
89333 | PF00069 | Pkinase | 6.60E-50 | CL0016 | Car | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Car14g01008 | - | - | cmo:103502985 | 631.328 |