Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car14g01008 ATGATGCCTTTCACCTTGGTTTCTGCATGGAACAAGAGGCGTAGACGAAAAAAGTCATCACAATTAGAACACCAAACGGAGGACCCTTGGATCTATAGACCGGCTGAGTTGTGGCAGCTTCAAGATCAAACCCTTCAAACACCCCCCAAAAGACACCATGCTTCCACTGTCTTCACCCTTAGGGAAATGGAAGAGGCCACCTGTTCCTTTAGCGACGCCAACTTGCTCGGTAAAGGCGGCTTTGGTCGCGTTTATCGAGCCACCTTGCGGTCGGGAGAGGTGGTAGCGGTCAAGAAAATGGAGCTGCCACCATTTAAGGAAGCAGAAGGGGAGCGTGAGTTCCGAGTGGAAGTGGACATTCTGAGCAGATTGGACCATCCAAATCTTGTTTCGTTGATTGGGTATTGTGCGGATGGGAAGCATCGGTTTCTAGTTTATGAGTACATGCACAAAGGGAACCTTCAAGATCATTTAAATGGGATCGGAGAATCTAAGATGGATTGGGGAGGGAGGCTGAAAGTGGCACTTGGGGCTGCCAAGGGATTGGCCTATCTCCATTCAAGCTCCGCTGCTGGGATGCCTATTGTCCATAGGGATTTCAAGTCCACAAATATTCTTCTTGACTCCAACTTGGATGCAAAGATATCAGACTTTGGACTTGCAAAGTTGATGCCAGAAGGACAAGAATCACATGTGACTGCAAGAGTCCTCGGCACGTTTGGATACTTCGACCCTGAGTATACTTCGACAGGAAAACTGAGCGTGCAGAGTGATGTGTATGCCTTTGGAGTGGTTCTTCTTGAGCTCCTCACAGGGCGCCGAGCAGTGGACTTGAACCAGGGCCCCAATGATCAAAACCTTGTCGTACAGGTAAGGCATATATTGAATGATCGAAAAAAGTTACGTAAAGTGATAGATCCTGAGATGAGTCGAAGTTCATACACAATGGAATCCATAGCCATATTTGCAAACTTGGCTTCACGCTGCGTCCGGACAGAGAGCAGTGAAAGGCCAACAATGATAGAATGTGTAAGAGAGCTTCAAATGATTATCTACACAAAGTTGCAAGGCCGCAAGGGCTAG 1083 47.74 MMPFTLVSAWNKRRRRKKSSQLEHQTEDPWIYRPAELWQLQDQTLQTPPKRHHASTVFTLREMEEATCSFSDANLLGKGGFGRVYRATLRSGEVVAVKKMELPPFKEAEGEREFRVEVDILSRLDHPNLVSLIGYCADGKHRFLVYEYMHKGNLQDHLNGIGESKMDWGGRLKVALGAAKGLAYLHSSSAAGMPIVHRDFKSTNILLDSNLDAKISDFGLAKLMPEGQESHVTARVLGTFGYFDPEYTSTGKLSVQSDVYAFGVVLLELLTGRRAVDLNQGPNDQNLVVQVRHILNDRKKLRKVIDPEMSRSSYTMESIAIFANLASRCVRTESSERPTMIECVRELQMIIYTKLQGRKG 360
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 8279901 8283259 - Carg27807-RA Car14g01008 160910
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car14g01008 360 PANTHER SERINE/THREONINE-PROTEIN KINASE PBL28-RELATED 1 357 - -
Car14g01008 360 Gene3D Transferase(Phosphotransferase) domain 1 149 358 - -
Car14g01008 360 ProSitePatterns Protein kinases ATP-binding region signature. 76 99 IPR017441 GO:0005524
Car14g01008 360 CDD STKc_IRAK 76 348 - -
Car14g01008 360 ProSiteProfiles Protein kinase domain profile. 70 351 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car14g01008 360 Gene3D Phosphorylase Kinase; domain 1 35 148 - -
Car14g01008 360 ProSitePatterns Serine/Threonine protein kinases active-site signature. 195 207 IPR008271 GO:0004672|GO:0006468
Car14g01008 360 SUPERFAMILY Protein kinase-like (PK-like) 47 352 IPR011009 -
Car14g01008 360 Pfam Protein kinase domain 72 345 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car14g01008 360 PANTHER OS01G0750732 PROTEIN 1 357 - -
Car14g01008 360 PIRSF ILK 38 359 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car14g01008 Car-Chr14:8279901 Car08g00002 Car-Chr8:8045 1.46E-92 dispersed
Car14g01008 Car-Chr14:8279901 Car14g01463 Car-Chr14:12216354 5.98E-92 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
89333 PF00069 Pkinase 6.60E-50 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car14g01008 - - cmo:103502985 631.328