Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car14g01013 ATGGGTTCCTCTTCGTCTTCTTTTTCGGTTATCAAATGGTTCTCCTTCTGCAGACCTACCTCTTCGATACTTCTTTTTCTTTACTGCATGCTCTTCTTCTTTCATACTGAAGCTATTTTGGGCGATTCAGACAAATCCGTGCTTCTTCAGTTCAAAAATGCTGTTTCCGACCCTTCCGGCTTGCTCTCCACCTGGACTTCCAGTTCTTCTGATTACTGCTTGTGGTTTGGCGTTTCGTGCGACCTCAATTCTCGGGTTGTGTCGCTCAACATTTCCGGGAATGGTGGTGCAGGTAATTTGAATGCATTTTCCTGTTCTGACTCTTCTAAATTTCCTCTTTATGGGTTTGGAATCAGGAGGGGTTGTGTCGGTAATAGAGGCTCACTGATGGGGAAGCTTCCGCCGGTGGTTGGGAAGCTCACTGAGCTGAGGACTTTGTCTCTTGCGTTTCATGGTTTTGAGGGTGAACTTCCGGGTGAAATCTTGGGATTGGAGAACCTTGAGGTTCTTGATCTTGAAGGAAACTCTTTAACTGGACTGCTTAATAATGATTTTGTCAGGCTGCGCAAGTTGCGCATTCTCAATCTTGGATTTAATAGGCTTACTGGTGAGATTCCTAGCTCGCTTTCTGGTTGTGCAAGTTTAGAGGTCATGAATTTAGCTGGGAATCAGTTGAATGGCACAATTCCACCGTTTGTTGGTCGGTTGAGAGGGGTCTACTTGTCTTTCAATTTTTTTACAGGATCCATTCCAAGTGAGCTTGGGAATAACTGTCAGCTTGAGCATCTTGACCTGTCTGGTAATTTTTTGGTCAGTGGGATTCCAAGTAGTTTGGGGAATTGCGGTCAGTTGCAGACATTGTTGCTGTACTCCAACATGCTGGAGGAGGCCATTCCAGCTGGATTTGGTAAGTTGCAGAAGCTGGAACTGCTTGATCTTTCTAGGAATAGTCTCAGTGGTCCAATACCCTCCGAGCTAGGAAACTGCTTGCAGTTGTCTGTCCTCGTGCTCTCGAATCTCTTCGATCCAATTCCCAAGATCAACTACACAGACAAAGACTCCCCAACTGAGGAACTTAGTGATGATAGTTTTAACTATTTTTCCGGCAGTATACCTGAGTCGATTACAACCCTTCCAAAGCTGAGGATATTGTGGGCCCCTAGTGCAAACCTTAATGGAAGATTCCCTTCCCAATGGGGTAAGTGTGAAAACTTGGAGATGGTCAACTTAGCTGGTAATTATCTTTACGGGGAGCTTCCAAGTGGATTTAGCGTCTGCAAAAAAATTCAAGTTCTTGATTTAAGCATGAACCGGCTTTCTGGAGAACTTGATAAAAACCTTCCTGTTCCTTACATGAATCTGTTTGATATTAGCGGTAATCTCTTAACTGGTGAGATTCCTATGGTCTGTGGCCATGATTGCTCACCGCCAATGCCCCATTCAAACAGATATTTGGATGTTGATGATTTGTCGTCTCGGTATCTTGCATTTTTTGCCACTAGTATTCGAGGTGCAACGCCTTTTAAATTTCTTGGAAATGATGATCTGATAATGCATAACTTTGGGGACAATAACTTTACTGGCAGTCTTCTGTCGCTACCATTTCCACGTGAAAGAATGGGAAGAAAAACTGTTTATGCTTATCTTGTAGGTGGAAATAAGCTGACTGGACGATTTCCTGATAGTTTGTTTGAAATATGCGATGGTTTGGCGGGATTGATCTTCAATATTAGCAGCAATAAAATCTCTGGTCCATTTTCTGTGGAAATTGGTAAAAAGTGTGGTTCTCTCAAATTCCTGGATGCATCTGGTAATCAGATGACTGGGCAGGTACCTGCTAGCTTTGGAGAGCTATTATCTCTGAATCACCTGAACCTAAGCAGGAACAAGTTTCAGTATCAAATACCGACTTCTCTCGGACATATAGCTGATTTGAAGTACCTTTGTTTGGCTGGCAATAACTTTAATGGTTCTATACCTTCTACATTGGGAAAGTTGCAGTCTTTGGAGTTGCTGGATCTTTCACGTAACGATCTTTCGGGTGAAATTCCAGTTGATCTTGTTAACTTGAGAGGCCTAAAAGTTCTACTTCTCAATAATAATTCACTCTCTGGACCGGTCCCCTCTGGTTTGGCAAATGTTACCACACTCTCTGCATTTAATGTGTCATTCAATAACTTGTCTGGTTCCTTACCATCAAATAATAACATGATCAAATGTAGTGGTGCGATTGGAAATCCTTACCTCCGCCCGTGCCATTTGTTTTCTCTGGCCGTGCCCTCATCTGGAATGCAAGGTTCAGAAGGCGACCCGAGTAGTCTTGCAGCTTCACCATCTGGTGTTGCACCCCAAACAAGTGGAGGTGGCAGCTTCAATTCAATTGAGATAGCATCCATTACGTCTGCCTCTGCCATTGTTTCTGTTCTTATTGCTTTGATTATCCTTTTTATATATACACGAAAGTGGAACACGAAGTCTAAAGTTCTTGGATCAATGAGAAAGGAAGTGACGGTTTTTACTGATATTGGGGTTTCCCTGACGTTTGATAATGTAGTGCGTGCCACAAGTAATTTCAATGCAAGCAATTGCATTGGAAGTGGAGGATTTGGGGCAACTTACAAGGCAGAGATCGCGTTGGGAGTGCTCGTTGCAATAAAACGACTTGCTGTAGGTCGATTTCAAGGTGTCCAACAGTTTGATGCAGAAATTAAAACTCTTGGAAGGCTGCGCCATCCGAACCTTGTCACCTTAATTGGTTACCATGCCAGTGAAACAGAGATGTTCCTGATATATAATTATTTGCCAGGAGGCAATTTGGAAAAATTTATCCAGGAGAGGTCTACAAGAGCAGTTGATTGGAGAATTCTTCACAAGATTGCGCTGGACATAGCCCGTGCGCTTGCATATCTTCATGATCAGTGTGTACCACGAGTCCTCCACCGCGATGTGAAACCGAGCAATATACTATTAGACGATGATTTCAATGCTTATCTCTCTGACTTTGGATTGGCCAGGCTTCTTGGGACTTCTGAAACCCATGCTACCACAGGTGTGGCTGGAACTTTCGGCTATGTCGCTCCTGAATATGCCATGACGTGTCGTGTCTCTGATAAAGCAGACGTGTACAGTTATGGCGTGGTTCTTCTCGAGCTACTCTCAGACAAGAAAGCACTAGATCCCTCGTTTTCCTCGTACGGTAACGGTTTTAACATAGTAGCTTGGGCGTGTATGCTGCTTCGGCAGGGGCGAGCCAAGGAATTCTTCACAGCAGGGTTGTGGGAGGTAGGTCCCCATGATGATTTGGTTGAAGTATTACACTTGGCAGTTGTTTGTACAGTGGACTCTTTGTCGACTAGGCCAACGATGAAACTAGTCGTACGAAGGCTTAAGCAGCTTCAACCGCCATCGTGTTAG 3414 43.97 MGSSSSSFSVIKWFSFCRPTSSILLFLYCMLFFFHTEAILGDSDKSVLLQFKNAVSDPSGLLSTWTSSSSDYCLWFGVSCDLNSRVVSLNISGNGGAGNLNAFSCSDSSKFPLYGFGIRRGCVGNRGSLMGKLPPVVGKLTELRTLSLAFHGFEGELPGEILGLENLEVLDLEGNSLTGLLNNDFVRLRKLRILNLGFNRLTGEIPSSLSGCASLEVMNLAGNQLNGTIPPFVGRLRGVYLSFNFFTGSIPSELGNNCQLEHLDLSGNFLVSGIPSSLGNCGQLQTLLLYSNMLEEAIPAGFGKLQKLELLDLSRNSLSGPIPSELGNCLQLSVLVLSNLFDPIPKINYTDKDSPTEELSDDSFNYFSGSIPESITTLPKLRILWAPSANLNGRFPSQWGKCENLEMVNLAGNYLYGELPSGFSVCKKIQVLDLSMNRLSGELDKNLPVPYMNLFDISGNLLTGEIPMVCGHDCSPPMPHSNRYLDVDDLSSRYLAFFATSIRGATPFKFLGNDDLIMHNFGDNNFTGSLLSLPFPRERMGRKTVYAYLVGGNKLTGRFPDSLFEICDGLAGLIFNISSNKISGPFSVEIGKKCGSLKFLDASGNQMTGQVPASFGELLSLNHLNLSRNKFQYQIPTSLGHIADLKYLCLAGNNFNGSIPSTLGKLQSLELLDLSRNDLSGEIPVDLVNLRGLKVLLLNNNSLSGPVPSGLANVTTLSAFNVSFNNLSGSLPSNNNMIKCSGAIGNPYLRPCHLFSLAVPSSGMQGSEGDPSSLAASPSGVAPQTSGGGSFNSIEIASITSASAIVSVLIALIILFIYTRKWNTKSKVLGSMRKEVTVFTDIGVSLTFDNVVRATSNFNASNCIGSGGFGATYKAEIALGVLVAIKRLAVGRFQGVQQFDAEIKTLGRLRHPNLVTLIGYHASETEMFLIYNYLPGGNLEKFIQERSTRAVDWRILHKIALDIARALAYLHDQCVPRVLHRDVKPSNILLDDDFNAYLSDFGLARLLGTSETHATTGVAGTFGYVAPEYAMTCRVSDKADVYSYGVVLLELLSDKKALDPSFSSYGNGFNIVAWACMLLRQGRAKEFFTAGLWEVGPHDDLVEVLHLAVVCTVDSLSTRPTMKLVVRRLKQLQPPSC 1137
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 8469010 8472423 + Carg26754-RA Car14g01013 160915
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car14g01013 1137 ProSitePatterns Protein kinases ATP-binding region signature. 864 886 IPR017441 GO:0005524
Car14g01013 1137 ProSiteProfiles Protein kinase domain profile. 858 1132 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car14g01013 1137 Pfam Protein kinase domain 861 1058 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car14g01013 1137 ProSitePatterns Serine/Threonine protein kinases active-site signature. 978 990 IPR008271 GO:0004672|GO:0006468
Car14g01013 1137 Pfam Leucine rich repeat N-terminal domain 42 81 IPR013210 -
Car14g01013 1137 Pfam Leucine rich repeat 166 225 IPR001611 GO:0005515
Car14g01013 1137 Pfam Leucine Rich Repeat 259 281 IPR001611 GO:0005515
Car14g01013 1137 Pfam Leucine Rich Repeat 307 329 IPR001611 GO:0005515
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car14g01013 Car-Chr14:8469010 Car15g00758 Car-Chr15:4281191 0 dispersed
Car01g00405 Car-Chr1:2313601 Car14g01013 Car-Chr14:8469010 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
89334 PF00069 Pkinase 7.90E-43 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car14g01013 - - csv:101218045 1930.22