Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car14g01037 ATGCAACTGGTACCAAATAATGATGAAAATACAGATGATATTCTGGAACGTGCGCCCATTTTAAGTCAATTGGATTTTCTGCCACAGTCAGTGGGATCATCATCCTCTGCTGAGATTATAGCTATAGGGAGAGAGAGCTCTGGTAGTGATGATGATTCACACAATCTTAATGTTGATGAAACCAGTCATCTGGTGAATGCAGACCAACCACAATGTCGTATATGCCTTGACACTGGAGGAGAAGATTTAATTGCTCCATGCCACTGCAAAGGCACTCAAAAGTATGTCCATAGATCATGTCTTGATAATTGGAGGTCCACAAAGGAGGGCTTTGCTTTTGCTCATTGTACAGAGTGCAGAGCTATGTTCGTGTTACGTGCAAATGTCCCTCCTGATCGCTGGTGGTTGAGACTGAAGTTTCAATTTCTTGTTGCTAGGGACCATGCGTTCATTTTCATTATTGTTCAACTGATTGTGGCATTACTTGGGGTGTTGGTTCTGGCGATCATCTTGGTTGGCTTACTCTATGGTTTCTTCATAGCCATTATATGCGGGCAGAGGATAAATGAACGCCACTACCATGTCCTTGCTAAGCAAGAACTGACAAAGGTCCAATCGAGAAATAACAAGAACGTTCCTGAATTAGACCCCAGCCATGTTATGGAAGCTAAGGATGTTGGCTGTATTAATCTGAAATTGGTGGATCCAACATTGTGGCACTTGAAGTCTTCAAGTAAGGAACTCTATCCT 750 42.53 MQLVPNNDENTDDILERAPILSQLDFLPQSVGSSSSAEIIAIGRESSGSDDDSHNLNVDETSHLVNADQPQCRICLDTGGEDLIAPCHCKGTQKYVHRSCLDNWRSTKEGFAFAHCTECRAMFVLRANVPPDRWWLRLKFQFLVARDHAFIFIIVQLIVALLGVLVLAIILVGLLYGFFIAIICGQRINERHYHVLAKQELTKVQSRNNKNVPELDPSHVMEAKDVGCINLKLVDPTLWHLKSSSKELYP 250
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 9146856 9148696 + Carg27835-RA Car14g01037 160939
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car14g01037 250 Pfam RING-variant domain 72 119 IPR011016 GO:0008270
Car14g01037 250 ProSiteProfiles Zinc finger RING-CH-type profile. 64 126 IPR011016 GO:0008270
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car11g00431 Car-Chr11:2411713 Car14g01037 Car-Chr14:9146856 6.22E-08 dispersed
Car14g01037 Car-Chr14:9146856 Car14g01039 Car-Chr14:9158372 1.31E-25 dispersed
Car14g01037 Car-Chr14:9146856 Car14g01040 Car-Chr14:9159876 1.25E-29 proximal
Car14g01037 Car-Chr14:9146856 Car14g01038 Car-Chr14:9153899 6.33E-36 tandem
Car01g00002 Car-Chr1:16079 Car14g01037 Car-Chr14:9146856 1.23E-108 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car14g01037 - - bhj:120075028 367.466