Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car14g01052 ATGGAGCCGTCTCATCAACTTTCACAAGCGCCCGAGGAGATTATTCTACGCTGGGACTCAGCTGCGCCGGAGGAACTGAAGGATAAGATGATTTTTGACTCAGATAGGGAAGAGATCGACCGATACTTGCAGGCCGTCGATGAAATCCAGAGGTCTATGTCGTCGGCTTCCATTTCCGACGATCAGAACAAAGTCGATTCCACTATGCAGATCGCCATGGCCAGGCTTGAGGATGAGTTCCGTTACATTCTGTCTAGTCATACCACTCCAATCGAGGTTGAGTCGCTTACTGATCCGAGTTCCTCTTCTCGCTCTATGTCCACTACTGAGAGTTGTGTATTCGAGGATGAAAACGACGAGGAAGCGGATTCGCAGGAAGTTCAGCTTGATTTAAGCAGCACTAGCAGTCCAAGGTTTGGGTCAAGTGGCCGATCGAGCTATCGGGCGATGAGTAGTATTCGTGAAATTGATCTGATACCTTCCGATGCGATTATCGATCTACGAAGTATTGCTGAGCGGATGATTACGGCGGGGTACCTGCGCGAGTGCATCCAAGTCTATGGCAGTGTGCGAAAGTCCACCTTCGACTCCAGCTTCCGACGTCTCGGAATTGAGAAACTGAGCATTGGAGATATCCAGAGGCTGGACTGGAATGAGCTGGAGATGAAGATCAGAAGGTGGATTAAAGCAGCAAAGGTTTCTATTAGGACCTTGTTTGCCAGTGAGAAGAAGCTCTGCGAGCAAATCTTTTATGGCATAGGGACAGCCATAGACGATGCTTGTTTCATGGAGACTGTAAAGGGCCCCGTGGTTCAGTTGTTTAATTTCGCCGAAGCGATCAGTATAAGCCGCAGATCGCCGGAGAAGCTGTTCAAGATTCTAGACCTCCACGATGCCTTAACGGATTTGATTCCTGACATCGATGTGATATTCGATTCAAAATCAGCGGAATATATTCGGATTCAGACGGCGGAGATATTGTCGCGGTTGGCGGAGGCCGTCAGAGGGACTTTGTCGGAGTTTGAAAACGCGGTGATGCGAGATCCGTCTCTGCAGCCGGTTCCCGGTGGGACGCTTCATCCGTTGACAAGGTATGTAATGAACTATGTGAGTCTGATTTCGGACTACAAAGTGACGTTAGACGAGCTCATCGTGTCCAAACCATCGACGGGCTCGAGGTACTCGGCCGACCCCACAACCCCAGATATGGACTTCGCTGAGCTAGAGGGTAAAACGCCATTAGCGCTCCATCTTATATGGAGCATCGTGGTTCTGCAGTTCAATTTGGAGGGAAAGTCCAGGCACTACAGAGACCCTTCTCTAGCTCACCTATTCATTATGAACAACGTTCATTACATTGTTCAGAAGATAAAATTATCCCCAGAATTGCGAGAAATGATCGGAGACGTTTATCTGAAAAGGCTGACCGGGAAGTTCCGACGGGCGGCGACAAACTACGAGAGAACAACGTGGGTGAATGTGCTGTATTGCCTGCGAAACGAAGGGTTGAATGTGGGCGGGAGCTTGTCTTCCGGCCCCGCAAAGAGCCTTATTAGAGAAAGATTCAAGACTTTCAATGCCATGTTTGAGGAGGTTCACAGGACACAATCAGCATGGTTGATACCAGACTCTCAGCTGAGGGAGGAGCTTCGCATATCCATAACTGAAAAGTTGATCCCAGCTTACAGGTCGTTTCTTGGCCTCCATGGCCACCACATAGAGAGTGGAAAGCACCCGGAAAATTACATCAAGTACTCGGTCGAGGAACTGGAAAATGCCATCTTGGATTTCTTTGAGGGTTGCTCAGTAACCCATAACTTGAGAAGGAGATCCCACTGA 1839 49.05 MEPSHQLSQAPEEIILRWDSAAPEELKDKMIFDSDREEIDRYLQAVDEIQRSMSSASISDDQNKVDSTMQIAMARLEDEFRYILSSHTTPIEVESLTDPSSSSRSMSTTESCVFEDENDEEADSQEVQLDLSSTSSPRFGSSGRSSYRAMSSIREIDLIPSDAIIDLRSIAERMITAGYLRECIQVYGSVRKSTFDSSFRRLGIEKLSIGDIQRLDWNELEMKIRRWIKAAKVSIRTLFASEKKLCEQIFYGIGTAIDDACFMETVKGPVVQLFNFAEAISISRRSPEKLFKILDLHDALTDLIPDIDVIFDSKSAEYIRIQTAEILSRLAEAVRGTLSEFENAVMRDPSLQPVPGGTLHPLTRYVMNYVSLISDYKVTLDELIVSKPSTGSRYSADPTTPDMDFAELEGKTPLALHLIWSIVVLQFNLEGKSRHYRDPSLAHLFIMNNVHYIVQKIKLSPELREMIGDVYLKRLTGKFRRAATNYERTTWVNVLYCLRNEGLNVGGSLSSGPAKSLIRERFKTFNAMFEEVHRTQSAWLIPDSQLREELRISITEKLIPAYRSFLGLHGHHIESGKHPENYIKYSVEELENAILDFFEGCSVTHNLRRRSH 612
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 9233012 9234850 - Carg27128-RA Car14g01052 160954
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car14g01052 612 MobiDBLite consensus disorder prediction 93 144 - -
Car14g01052 612 MobiDBLite consensus disorder prediction 93 112 - -
Car14g01052 612 Gene3D Exocyst complex component Exo70 14 608 - -
Car14g01052 612 SUPERFAMILY Cullin repeat-like 25 599 IPR016159 -
Car14g01052 612 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 9 611 - -
Car14g01052 612 PANTHER EXOCYST COMPLEX PROTEIN EXO70 9 611 IPR004140 GO:0000145|GO:0006887
Car14g01052 612 MobiDBLite consensus disorder prediction 127 144 - -
Car14g01052 612 Pfam Exo70 exocyst complex subunit 226 595 IPR046364 GO:0000145|GO:0005546|GO:0006887
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car01g00006 Car14g01052 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car10g00053 Car-Chr10:236582 Car14g01052 Car-Chr14:9233012 2.30E-151 dispersed
Car11g00032 Car-Chr11:171293 Car14g01052 Car-Chr14:9233012 1.46E-151 dispersed
Car13g00651 Car-Chr13:8066683 Car14g01052 Car-Chr14:9233012 1.24E-155 dispersed
Car14g01052 Car-Chr14:9233012 Car18g00228 Car-Chr18:1303178 2.67E-154 dispersed
Car14g01052 Car-Chr14:9233012 Car01g00006 Car-Chr1:39557 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car14g01052 K07195 - csv:101204229 1096.65