Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car14g01069 ATGCTTCATTCCGTAATAGCTGCTAGACAAACTTGTAGCCTACTTGCTGTCACTTGCGGAAGTGTTCTTAAAGCGAAATGCGAGGAGGATGTCGATGAGGATAAGTTGAAATATCCGTTTCCGGGATTAGTTTCTTCTGGACGATTGGAGGTTCGAGCTTTGACAAATCCAAGCACGGATGAATTTAGTAGAATTGTGGAATCGTGTCTACCGAGCTTTGTCTACTTGCAAGGGGAACAACTAGGAAATGATGAAATTGGATCTTTGGTTTGGAATGGTGTTGATTTGTTTCTTGAAGATTTATGTGGGCTGTTCAATACTGCACTACCAACTGTTGTGTATTTAGAAATCCCAAATGGAGGCAGAATAGCGGAGGCGCTTCATTCTAAGGGAATTCCTTATGTCATGTATTGGAACAGCACATTTTCGTGTTATGCTGCAGCTCATTTTCGTAATGCGTTGTTTTCAGTGTTGCAGAGTTCATCTACTCATACATGGGATGCTTTTCAGCTTGCACGTGCTGCTTTTAGGCTTCATTGCATGGGGAGCAGTCATGCTCTGCCTGGGATTGTTGACAGTATTACGAGTGGTTTAGAGCCACAGGTTATTGGGGAACCCCTAAAGATTAATGTAGAACCCCCCAAGGTCGACGTAGGTGAAGGTGAAGATGAAGATGGTTCATTAGAAACTCTCACTGCCATAAGTATTCACGATAATAACGTGACCGTGAGATTTCTTATCTGTGGAGTGCCTTGCACACCGGATGCATGCTTGTTGAGATCATTGGAGGATGGCCTTAATGCTCTTTTGAACATTGAAATACGTGGGTGTAAACTTCAGGGAAAGTTCAGTGCTCCTCCGCCACCTCTTCAGGCAGGATCCTTTGCTCGTGGAGTTGTGACGATGCGGTGTGATATGGTGACTTGTAGTTCAGCCCACATCTCAATATTGGTGTCTGGTAGCCCTCATACTTGTTTTGATGATCAGCTCTTAGAGAAACATATCAAACACGAGATTATTGAAAATAGCCAGTTAGTTCATGCCATGTATGATTGTGAGGACAACAAACATCACATGCACGAGCCTCGAAAATCTGCTTCAGTTGCCTGTGGGGCAGCAGTATTTGAGGTTTCCATGAAGGTTCCCGCTTGGGCATCACAGGTCTTGAGGCAGCTAGCACCTGATATGTCGTATCGGAGTTTAGTTGCACTCGGCGTTGGGGGAGTTCAGGGTTTGCCTGTTGCTTCTTTCGAGAAAGAGGATGCTGAGCGATTGCTCTTCTTTTGTTCAAAAGATGTGAATGATAAACATTCAGATCAGTTGCTTGTAAGCGTATTACCCAGCTGGTTTAAGCCACCGCCTCCTAGTAGAAAGAGAGTAGAACCAAGCCAAGGAATACGGAGCACCCTTTCACACGATCGTCTTGCATATGCAATCATCCCTTCCATTAGAAGAGTAGGTAGAGAGGAGCCTGCACCAATGAATGGGTTCAAGACACCTTTACTCCCATCAAGGAAAAGATTAAAAGTAGCCTCCATGAGGCCTATTCCACGCGTGCATAGGAATAAAATGACGCCGTTCTCTGGATTGACTGAAGCAGATGGGAACAATGGAGGACAACCCAAGGCTTGTTTTCCTGTTGTTACCCCATCAAAGCATGTAACTGTAGGATCAACTTCTGCAACACAAAGAAAATCCTTTTCGAGCTCATCTCAGTCTAAGCAGATTATTTCCTTAAACCCGCTGCCTCTAAAGAAGCATGGTTGTGGAAGAAACCCAATTCAAGATTGCTCAGAGGAGGAGTTCTTGAAGGATGTTATGGAGTTTCTACTACTAAGAGGACATTCACGACTTATACCTCAAGGTGGACTTGAGGAGTTCCCAGACGCCATACTCAACGGAAAGCGTCTTGACCTCTATAACTTGTATAAGGAGGTGGTCACTCGAGGAGGCTTTCATGTCGGTAACGGTATCAACTGGAAAGGGCAGATCTTCTCTAAGATGCATAACTACACAATGTCCAACAGAATGACTGGTGTCGGAAATACACTGAAACGACATTACGAGACGTACCTTCTCGAATATGAATTGGCTCATGATGATGTAGATGGAGAATGCTGCCTTTTGTGCCACAGTAGTGCAGCAGGGGATTGGGTGAACTGTGGTATTTGTGGTGAATGGGCTCATTTCGGGTGCGATCGAAGGCAGGGTCTCGGTGCATTTAAGGATTATGCCAAAACAGATGGGCTAGAGTATGTTTGTCCACATTGTAGCATTACAACTTACAACAAGAAGAAACCACACAGAGTAGCAAACGGGTCTCCGCAAGGACTAACGAATCCACCACGGATACCTTGA 2358 44.83 MLHSVIAARQTCSLLAVTCGSVLKAKCEEDVDEDKLKYPFPGLVSSGRLEVRALTNPSTDEFSRIVESCLPSFVYLQGEQLGNDEIGSLVWNGVDLFLEDLCGLFNTALPTVVYLEIPNGGRIAEALHSKGIPYVMYWNSTFSCYAAAHFRNALFSVLQSSSTHTWDAFQLARAAFRLHCMGSSHALPGIVDSITSGLEPQVIGEPLKINVEPPKVDVGEGEDEDGSLETLTAISIHDNNVTVRFLICGVPCTPDACLLRSLEDGLNALLNIEIRGCKLQGKFSAPPPPLQAGSFARGVVTMRCDMVTCSSAHISILVSGSPHTCFDDQLLEKHIKHEIIENSQLVHAMYDCEDNKHHMHEPRKSASVACGAAVFEVSMKVPAWASQVLRQLAPDMSYRSLVALGVGGVQGLPVASFEKEDAERLLFFCSKDVNDKHSDQLLVSVLPSWFKPPPPSRKRVEPSQGIRSTLSHDRLAYAIIPSIRRVGREEPAPMNGFKTPLLPSRKRLKVASMRPIPRVHRNKMTPFSGLTEADGNNGGQPKACFPVVTPSKHVTVGSTSATQRKSFSSSSQSKQIISLNPLPLKKHGCGRNPIQDCSEEEFLKDVMEFLLLRGHSRLIPQGGLEEFPDAILNGKRLDLYNLYKEVVTRGGFHVGNGINWKGQIFSKMHNYTMSNRMTGVGNTLKRHYETYLLEYELAHDDVDGECCLLCHSSAAGDWVNCGICGEWAHFGCDRRQGLGAFKDYAKTDGLEYVCPHCSITTYNKKKPHRVANGSPQGLTNPPRIP 785
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 9464085 9469830 - Carg06389-RA Car14g01069 160971
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car14g01069 785 Pfam ARID/BRIGHT DNA binding domain 599 696 IPR001606 GO:0003677
Car14g01069 785 ProSiteProfiles ARID domain profile. 596 700 IPR001606 GO:0003677
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car14g01069 Car17g00618 CCT
Car14g01069 Car17g00618 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car01g00013 Car-Chr1:69254 Car14g01069 Car-Chr14:9464085 0 wgd
Car14g01069 Car-Chr14:9464085 Car17g00618 Car-Chr17:5813252 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
4692 PF01388 ARID 7.20E-14 CL0123 Car TR
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car14g01069 - - cmax:111479879 1547.72