Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car14g01074 ATGGATTCCGTCAAGTCCTTCAAGGGCTACGGCAAGGTCGACGAGCTCGAACACCAAGCTTTCCGTCAGAAAACTCGCCGCCGACTCATTATACTACTTCTCTCTATTGTTCTTCTTATTGCTTTGGTCATCGGCGCCGTCGTCGGAATCGTCATTCATAAACGGAACTCTTCCTCTTCTTCGACCACGAGTTCGACTCCTCCCACTGAGCTCCCTCCGGCCGCTTCACTCAAAACTCTCTGTAGCGTCACTCAGTATCCGAGTTCCTGTCAATCCTCTCTCGAAAACTCCAACACCACCGATCCGATATTTCTCTTCAAGCTTTCTCTACGAGTCGCCACCGATTCGATCTCAAAGCTCTCTGATTATGCCTCTAACCTAAATTCCAGTACTAGTGATGTGAAGGTTAAAGCTGCGATTGGAATCTGCTCGTCTGTTTTTAAAGATGCCATTGACACACTAAACGACACCGTTTCATCCATGGAAGTGGATCGCCATGGCGAGAAGTTCTTGTCGCCGTCGAGGATTGAAGATCTGAAAACCTGGCTGAGCACCACAATCACAGACCAAGAAACCTGCCTCGATGCCATTCGAGATCTAAACCAGACCGCGGTTCTCGAAAATTTGCAAGCGGTAATGGCGAACTCGACCGAGTTCACTAGCAATAGTTTAGCGATTGTGACCAAAATCCTGGGGCTGTTGGCGGATTTCAACATCCCTATCCACCGGAAACTGATGGCGTTCCCGGAGTGGTTAAGCCCCGGCGATCGGAGGCTTTTGCAGGAGAACAATGTGACGGTGCATGCGACGGTGTCGAAGGATGGGACAGGGGATTTCACGACGATCAAAGAGGCCGTAGCAGCGGTGCCAAAGAAGAGTAAAGAAAGATTCATCATCTATGTAAAAGAAGGATTATACGAAGAGAATGTGATTCTGGATAAGAGCAAGTGGAATGTTATGATGTACGGAGATGGCAAAACCAGAACCATTGTTTCAGGCCGCCTTAACTTCATCGACGGCACTCCCACCTACGCCACCGCCACTTTTGCTGTTCAAGGCAAAGGATTCATCGGGAAGGATATGGGGTTCATCAACACAGCCGGGCCGGCCAAACACCAGGCCGTCGCCTTCCGGTCAGGCTCCGACCTATCTGTGTTGTACGGATGTTCATTTGATGGCTATCAAGACACTCTTTACGCCCATTCAAACCGTCAATTCTACAGGAACTGCGACATCACCGGCACAATCGACTTCATCTTCGGCAACGCCGCCGTGGTATTCCAGAACTGCAACATCCGGCCCAGGCAGCCACTTCCCAATCAGTTCAACACCATCACAGCCCAAGGCAAAAAGGACATCAACCAAAACTCCGGCATTTCCATTCAGAAATGCACTTTTTCTGCCTACAACGACAGTCTCACTGCCCCCACTTACTTGGGGCGGCCATGGAAGGAATTTTCCACCACCGTGATTATGCAGTCGGAGATTGGGGGCTTCCTGCAGCCCATCGGGTGGAAGGAATGGGTGAGCGGGCAGGACCCACCCAGCAGCATATTTTACGGAGAGTATCAGAATAGTGGGCCTGGATCCAACGTGGACAAGAGGGTCAAATGGACCGGTTACAGGCCCAGTCTTACCGACGCCGAGGCCGCAAAGTTCACCGTCCGGACGTTCCTCAACGGCGAGGAATGGTTGCCGGCCACCAGTGTAAAATTTGATACATCCTTGTGA 1731 51.01 MDSVKSFKGYGKVDELEHQAFRQKTRRRLIILLLSIVLLIALVIGAVVGIVIHKRNSSSSSTTSSTPPTELPPAASLKTLCSVTQYPSSCQSSLENSNTTDPIFLFKLSLRVATDSISKLSDYASNLNSSTSDVKVKAAIGICSSVFKDAIDTLNDTVSSMEVDRHGEKFLSPSRIEDLKTWLSTTITDQETCLDAIRDLNQTAVLENLQAVMANSTEFTSNSLAIVTKILGLLADFNIPIHRKLMAFPEWLSPGDRRLLQENNVTVHATVSKDGTGDFTTIKEAVAAVPKKSKERFIIYVKEGLYEENVILDKSKWNVMMYGDGKTRTIVSGRLNFIDGTPTYATATFAVQGKGFIGKDMGFINTAGPAKHQAVAFRSGSDLSVLYGCSFDGYQDTLYAHSNRQFYRNCDITGTIDFIFGNAAVVFQNCNIRPRQPLPNQFNTITAQGKKDINQNSGISIQKCTFSAYNDSLTAPTYLGRPWKEFSTTVIMQSEIGGFLQPIGWKEWVSGQDPPSSIFYGEYQNSGPGSNVDKRVKWTGYRPSLTDAEAAKFTVRTFLNGEEWLPATSVKFDTSL 576
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 9485745 9487924 - Carg06395-RA Car14g01074 160976
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car14g01074 576 Pfam Pectinesterase 269 561 IPR000070 GO:0030599|GO:0042545
Car14g01074 576 ProSitePatterns Pectinesterase signature 2. 412 421 IPR033131 -
Car14g01074 576 Pfam Plant invertase/pectin methylesterase inhibitor 77 226 IPR006501 GO:0004857
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car14g01074 Car-Chr14:9485745 Car15g00960 Car-Chr15:7028201 5.72E-131 dispersed
Car14g01074 Car-Chr14:9485745 Car14g01075 Car-Chr14:9490617 3.58E-122 tandem
Car13g00376 Car-Chr13:6327052 Car14g01074 Car-Chr14:9485745 3.93E-24 transposed
Car13g00955 Car-Chr13:9653258 Car14g01074 Car-Chr14:9485745 1.65E-28 transposed
Car14g01074 Car-Chr14:9485745 Car17g00613 Car-Chr17:5775345 9.99E-133 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car14g01074 - - csv:101207508 1006.13