Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Car14g01081 | ATGTTATTGGCCTGCCTTTCAACTTATTATATTCTGACAGAACAAATTCTCTTGAAAGATCCATTGGCAGAGATGAAGCTTGTTCATACTTCATCCCCATTTGATGCAAAATCATTGGATTCTCCTGCTTCAATCAATCTTAAGCCCCCACCTACTGATTCTCATAAATCATTCGATGATAATGATACATCAAAGATACCTGTAGTGAAGAAGACCGTTGCCACCCCTCCGATAAGTGTGAAGTCATATTCAATAGCAGATCTTCAAATGGCTACGGGCAGTTTTGATGTAGAAAACCTTCTCGGTGAGGGATCGGTTGGACGTGTTTATCGGGCTCAGTTCGATGATGGGAAGGTTCTTGCCGTGAAGAAAATAGATTCAGCCGCCTTCCCTAGAGGATTGTTGGAAGATTTCACAGAGATAGTTGCTAATGTATCTCAGTTGCATCATCCTAATGTAACCGAGCTAATGGGTTATTGCTCAGAGCATGGCCTGCATTTGCTAGTATATGAGTTCCATAAGAATGGCTCGCTACATGACTTTTTGCACATATCAGATGAATATAGCAAGCCACTGACCTGGAACTCCCGTGTCAAGATTGCTTTGGGGACGGCTCGTGCATTAGATTCAAGGCCAAGAGATGAGCAATCCTTGGTTCGATGGGCTACACCTCAGCTCCATGACATTGATGCCTTGACGAAAATGGTTGATCCTGCTCTTAAAGGGCTCTACCCAGTCAAGTCTCTCTCAAGATTTGCAGACGTTGTGGCTCTTTGCGTCCAGCCGGAGCCTGAATTTAGACCACCTATGTCAGAGGTGGTGGAATCCTTGGTTCGGCTTGTGCAGAGGTCCAACATGAGCAGAAGAACGTTTGGAAGTGATCATGGATCATCTTTTAGAACTGATGATCCTGATGCACGTGAGACATCTTAA | 933 | 44.27 | MLLACLSTYYILTEQILLKDPLAEMKLVHTSSPFDAKSLDSPASINLKPPPTDSHKSFDDNDTSKIPVVKKTVATPPISVKSYSIADLQMATGSFDVENLLGEGSVGRVYRAQFDDGKVLAVKKIDSAAFPRGLLEDFTEIVANVSQLHHPNVTELMGYCSEHGLHLLVYEFHKNGSLHDFLHISDEYSKPLTWNSRVKIALGTARALDSRPRDEQSLVRWATPQLHDIDALTKMVDPALKGLYPVKSLSRFADVVALCVQPEPEFRPPMSEVVESLVRLVQRSNMSRRTFGSDHGSSFRTDDPDARETS | 310 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
14 | 9513853 | 9516029 | - | Carg06402-RA | Car14g01081 | 160983 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Car14g01081 | 310 | MobiDBLite | consensus disorder prediction | 295 | 310 | - | - | |
Car14g01081 | 310 | Pfam | Protein tyrosine and serine/threonine kinase | 97 | 208 | IPR001245 | GO:0004672|GO:0006468 | |
Car14g01081 | 310 | MobiDBLite | consensus disorder prediction | 288 | 310 | - | - | |
Car14g01081 | 310 | ProSiteProfiles | Protein kinase domain profile. | 95 | 310 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Car14g01081 | 310 | MobiDBLite | consensus disorder prediction | 40 | 63 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Car14g01081 | Car-Chr14:9513853 | Car04g00906 | Car-Chr4:5174426 | 3.15E-38 | dispersed | |
Car01g00018 | Car-Chr1:92178 | Car14g01081 | Car-Chr14:9513853 | 2.46E-59 | wgd | |
Car14g01081 | Car-Chr14:9513853 | Car17g00608 | Car-Chr17:5738112 | 3.29E-46 | wgd | |
Car14g01081 | Car-Chr14:9513853 | Car08g00721 | Car-Chr8:4628073 | 2.21E-46 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
89335 | PF07714 | PK_Tyr_Ser-Thr | 3.70E-14 | CL0016 | Car | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Car14g01081 | - | - | csv:101208239 | 347.051 |