Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car14g01081 ATGTTATTGGCCTGCCTTTCAACTTATTATATTCTGACAGAACAAATTCTCTTGAAAGATCCATTGGCAGAGATGAAGCTTGTTCATACTTCATCCCCATTTGATGCAAAATCATTGGATTCTCCTGCTTCAATCAATCTTAAGCCCCCACCTACTGATTCTCATAAATCATTCGATGATAATGATACATCAAAGATACCTGTAGTGAAGAAGACCGTTGCCACCCCTCCGATAAGTGTGAAGTCATATTCAATAGCAGATCTTCAAATGGCTACGGGCAGTTTTGATGTAGAAAACCTTCTCGGTGAGGGATCGGTTGGACGTGTTTATCGGGCTCAGTTCGATGATGGGAAGGTTCTTGCCGTGAAGAAAATAGATTCAGCCGCCTTCCCTAGAGGATTGTTGGAAGATTTCACAGAGATAGTTGCTAATGTATCTCAGTTGCATCATCCTAATGTAACCGAGCTAATGGGTTATTGCTCAGAGCATGGCCTGCATTTGCTAGTATATGAGTTCCATAAGAATGGCTCGCTACATGACTTTTTGCACATATCAGATGAATATAGCAAGCCACTGACCTGGAACTCCCGTGTCAAGATTGCTTTGGGGACGGCTCGTGCATTAGATTCAAGGCCAAGAGATGAGCAATCCTTGGTTCGATGGGCTACACCTCAGCTCCATGACATTGATGCCTTGACGAAAATGGTTGATCCTGCTCTTAAAGGGCTCTACCCAGTCAAGTCTCTCTCAAGATTTGCAGACGTTGTGGCTCTTTGCGTCCAGCCGGAGCCTGAATTTAGACCACCTATGTCAGAGGTGGTGGAATCCTTGGTTCGGCTTGTGCAGAGGTCCAACATGAGCAGAAGAACGTTTGGAAGTGATCATGGATCATCTTTTAGAACTGATGATCCTGATGCACGTGAGACATCTTAA 933 44.27 MLLACLSTYYILTEQILLKDPLAEMKLVHTSSPFDAKSLDSPASINLKPPPTDSHKSFDDNDTSKIPVVKKTVATPPISVKSYSIADLQMATGSFDVENLLGEGSVGRVYRAQFDDGKVLAVKKIDSAAFPRGLLEDFTEIVANVSQLHHPNVTELMGYCSEHGLHLLVYEFHKNGSLHDFLHISDEYSKPLTWNSRVKIALGTARALDSRPRDEQSLVRWATPQLHDIDALTKMVDPALKGLYPVKSLSRFADVVALCVQPEPEFRPPMSEVVESLVRLVQRSNMSRRTFGSDHGSSFRTDDPDARETS 310
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 9513853 9516029 - Carg06402-RA Car14g01081 160983
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car14g01081 310 MobiDBLite consensus disorder prediction 295 310 - -
Car14g01081 310 Pfam Protein tyrosine and serine/threonine kinase 97 208 IPR001245 GO:0004672|GO:0006468
Car14g01081 310 MobiDBLite consensus disorder prediction 288 310 - -
Car14g01081 310 ProSiteProfiles Protein kinase domain profile. 95 310 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car14g01081 310 MobiDBLite consensus disorder prediction 40 63 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car14g01081 Car-Chr14:9513853 Car04g00906 Car-Chr4:5174426 3.15E-38 dispersed
Car01g00018 Car-Chr1:92178 Car14g01081 Car-Chr14:9513853 2.46E-59 wgd
Car14g01081 Car-Chr14:9513853 Car17g00608 Car-Chr17:5738112 3.29E-46 wgd
Car14g01081 Car-Chr14:9513853 Car08g00721 Car-Chr8:4628073 2.21E-46 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
89335 PF07714 PK_Tyr_Ser-Thr 3.70E-14 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car14g01081 - - csv:101208239 347.051